RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 DAZ1Q9NQZ3 744 aaKnown RBP15.86■□□□□ 0.13
SQLE-206ENST00000523430 TRAV8-2A0A0B4J237 113 aa15.85■□□□□ 0.13
SQLE-206ENST00000523430 IGHV7-4-1A0A0J9YVY3 117 aa15.85■□□□□ 0.13
SQLE-206ENST00000523430 UBE2E2Q96LR5 201 aa15.85■□□□□ 0.13
SQLE-206ENST00000523430 SLC50A1Q9BRV3 221 aa15.85■□□□□ 0.13
SQLE-206ENST00000523430 SRD5A3Q9H8P0 318 aa15.85■□□□□ 0.13
SQLE-206ENST00000523430 TCL1AP56279 114 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 MYO9AB2RTY4 2548 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 OTOGQ6ZRI0 2925 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 IGHV4OR15-8A0A075B7B6 117 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 A0A087WW49 117 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 TYMSP04818 313 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 LCN12Q6JVE5 192 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 C18orf65Q6ZTR6 163 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 GPHB5Q86YW7 130 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 SELENOKQ9Y6D0 94 aa15.84■□□□□ 0.13
SQLE-206ENST00000523430 SERTM2A0A1B0GWG4 89 aa15.83■□□□□ 0.12
SQLE-206ENST00000523430 PRAC2D3DTV9 90 aa15.83■□□□□ 0.12
SQLE-206ENST00000523430 GATCO43716 136 aaKnown RBP15.83■□□□□ 0.12
SQLE-206ENST00000523430 FAM106AQ4KMX7 169 aa15.83■□□□□ 0.12
SQLE-206ENST00000523430 ZC2HC1AQ96GY0 325 aa15.83■□□□□ 0.12
SQLE-206ENST00000523430 GRAMD2BQ96HH9 432 aa15.83■□□□□ 0.12
SQLE-206ENST00000523430 TMEM160Q9NX00 188 aa15.83■□□□□ 0.12
SQLE-206ENST00000523430 PHOX2AO14813 284 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 LY6G6DO95868 133 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 VGLL1Q99990 258 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 RHPN1-AS1Q9BWJ2 59 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 ZNF492Q9P255 531 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 C19orf71A6NCJ1 209 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 SRD5A1P18405 259 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 MEOX2P50222 304 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 TCTEX1D4Q5JR98 221 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 ARL6IP6Q8N6S5 226 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 Q8TAT8 98 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 C8orf49Q96NF6 230 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 ZFP30Q9Y2G7 519 aa15.82■□□□□ 0.12
SQLE-206ENST00000523430 SMIM27A0A1W2PRY6 76 aa15.81■□□□□ 0.12
SQLE-206ENST00000523430 A0A1W2PS18 150 aa15.81■□□□□ 0.12
SQLE-206ENST00000523430 HIST2H2BDQ6DRA6 164 aa15.81■□□□□ 0.12
SQLE-206ENST00000523430 GBGT1Q8N5D6 347 aa15.81■□□□□ 0.12
SQLE-206ENST00000523430 K7EMT4 169 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 DEFB136Q30KP8 78 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 FRZBQ92765 325 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 SMPXQ9UHP9 88 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 TRAV9-1A0A075B6T8 112 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 TMEM213A2RRL7 107 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 RNASE1P07998 156 aaKnown RBP15.8■□□□□ 0.12
SQLE-206ENST00000523430 SCGB2A2Q13296 93 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 C16orf92Q96LL3 132 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 RPP21Q9H633 154 aaKnown RBP15.8■□□□□ 0.12
SQLE-206ENST00000523430 BIN3Q9NQY0 253 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 UFC1Q9Y3C8 167 aa15.8■□□□□ 0.12
SQLE-206ENST00000523430 P01737 135 aa15.79■□□□□ 0.12
SQLE-206ENST00000523430 FRMD6-AS1P0C7T7 363 aa15.79■□□□□ 0.12
SQLE-206ENST00000523430 HOXD3P31249 432 aaPredicted RBP15.79■□□□□ 0.12
SQLE-206ENST00000523430 SYNJ2BPP57105 145 aa15.79■□□□□ 0.12
SQLE-206ENST00000523430 ACTL10Q5JWF8 245 aa15.79■□□□□ 0.12
SQLE-206ENST00000523430 BTF3L4Q96K17 158 aa15.79■□□□□ 0.12
SQLE-206ENST00000523430 SAV1Q9H4B6 383 aaPredicted RBP15.79■□□□□ 0.12
SQLE-206ENST00000523430 SOCS3O14543 225 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 SPINK4O60575 86 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BKO60814 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BJP06899 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BOP23527 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BBP33778 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BDP58876 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BCP62807 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 ERCC8Q13216 396 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST2H2BEQ16778 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 KHDC1LQ5JSQ8 128 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BHQ93079 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 C20orf173Q96LM9 149 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BNQ99877 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 HIST1H2BMQ99879 126 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 IGKV3-7A0A075B6H7 116 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 TRGC1P0CF51 173 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 RPL11P62913 178 aaKnown RBP15.78■□□□□ 0.12
SQLE-206ENST00000523430 GPR61Q9BZJ8 451 aa15.78■□□□□ 0.12
SQLE-206ENST00000523430 CRIP1P50238 77 aa15.77■□□□□ 0.11
SQLE-206ENST00000523430 SNRPEP62304 92 aaKnown RBP15.77■□□□□ 0.11
SQLE-206ENST00000523430 REC114Q7Z4M0 266 aa15.77■□□□□ 0.11
SQLE-206ENST00000523430 MRPL53Q96EL3 112 aaKnown RBP15.77■□□□□ 0.11
SQLE-206ENST00000523430 DAZAP1Q96EP5 407 aaKnown RBP15.77■□□□□ 0.11
SQLE-206ENST00000523430 A8MWP6 167 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 NPIPB6E9PJ23 425 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 S100A6P06703 90 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 HILS1P60008 231 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 TSKUQ8WUA8 353 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 PRR25Q96S07 402 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 NEU1Q99519 415 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 NRN1Q9NPD7 142 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 CBLN1P23435 193 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 FABP9Q0Z7S8 132 aa15.76■□□□□ 0.11
SQLE-206ENST00000523430 ZNF418Q8TF45 676 aaPredicted RBP15.76■□□□□ 0.11
SQLE-206ENST00000523430 WIPF2Q8TF74 440 aaPredicted RBP15.76■□□□□ 0.11
SQLE-206ENST00000523430 C5orf52A6NGY3 159 aa15.75■□□□□ 0.11
SQLE-206ENST00000523430 FBLL1A6NHQ2 334 aaKnown RBP15.75■□□□□ 0.11
SQLE-206ENST00000523430 CDX1P47902 265 aaPredicted RBP15.75■□□□□ 0.11
SQLE-206ENST00000523430 SLURP1P55000 103 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms