RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 NHLH2Q02577 135 aa11.52□□□□□ -0.57
CLN8-206ENST00000523237 LRRC37A5PQ49AS3 106 aa11.52□□□□□ -0.57
CLN8-206ENST00000523237 POM121L12Q8N7R1 296 aa11.52□□□□□ -0.57
CLN8-206ENST00000523237 NPCDR1Q9BY65 106 aa11.52□□□□□ -0.57
CLN8-206ENST00000523237 ZNF253O75346 499 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 HTN1P15515 57 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 AZU1P20160 251 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 DEFA1P59665 94 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 DEFA3P59666 94 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 OR5C1Q8NGR4 320 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 THAP6Q8TBB0 222 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 C16orf74Q96GX8 76 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 MARVELD1Q9BSK0 173 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 ZNF586Q9NXT0 402 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 OR5AC2Q9NZP5 309 aa11.51□□□□□ -0.57
CLN8-206ENST00000523237 PRAC2D3DTV9 90 aa11.5□□□□□ -0.57
CLN8-206ENST00000523237 TMEM14CQ9P0S9 112 aa11.5□□□□□ -0.57
CLN8-206ENST00000523237 VPS13DQ5THJ4 4388 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 TRBV19A0A075B6N1 114 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 PLAC8L1A1L4L8 177 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 H7BYZ3 331 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 DEFB130BP0DP73 79 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 DEFB130AP0DP74 79 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 ZNF493Q6ZR52 646 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 MRPL53Q96EL3 112 aaKnown RBP11.49□□□□□ -0.57
CLN8-206ENST00000523237 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
CLN8-206ENST00000523237 NPIPB6E9PJ23 425 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 H0YIZ8 118 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 HIST1H1EP10412 219 aaKnown RBP11.48□□□□□ -0.57
CLN8-206ENST00000523237 H2BFSP57053 126 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 PDE6HQ13956 83 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 CLINT1Q14677 625 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 TMEM88Q6PEY1 159 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 UBE2DNLQ8IWF7 75 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 PARD6GQ9BYG4 376 aaPredicted RBP11.48□□□□□ -0.57
CLN8-206ENST00000523237 TIMM9Q9Y5J7 89 aa11.48□□□□□ -0.57
CLN8-206ENST00000523237 TIMM8BQ9Y5J9 83 aaPredicted RBP11.48□□□□□ -0.57
CLN8-206ENST00000523237 SSNA1O43805 119 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 PET100P0DJ07 73 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 PYYP10082 97 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 LEPP41159 167 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 FCN2Q15485 313 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 GCSAMLQ5JQS6 135 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 GFI1BQ5VTD9 330 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 TMEM263Q8WUH6 116 aaKnown RBP11.47□□□□□ -0.57
CLN8-206ENST00000523237 PPP1R1CQ8WVI7 109 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 WDR61Q9GZS3 305 aaKnown RBP11.47□□□□□ -0.57
CLN8-206ENST00000523237 BATF3Q9NR55 127 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 PRELID1Q9Y255 219 aa11.47□□□□□ -0.57
CLN8-206ENST00000523237 FRAS1Q86XX4 4008 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 NDUFB4O95168 129 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 CT45A10P0DMU9 189 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 KIR3DS1Q14943 382 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 RNASE8Q8TDE3 154 aaKnown RBP11.46□□□□□ -0.57
CLN8-206ENST00000523237 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 SLC25A2Q9BXI2 301 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 AAMDCQ9H7C9 122 aa11.46□□□□□ -0.57
CLN8-206ENST00000523237 CBY3A6NI87 242 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 C17orf112F2Z3M2 114 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 J3KRW8 73 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 M0R3E3 92 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 ATP5G1P05496 136 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 ATP5G3P48201 142 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 RNF212Q495C1 297 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 ATP5SQ99766 215 aa11.45□□□□□ -0.58
CLN8-206ENST00000523237 MRPL32Q9BYC8 188 aaKnown RBP11.45□□□□□ -0.58
CLN8-206ENST00000523237 F5H768 121 aa11.44□□□□□ -0.58
CLN8-206ENST00000523237 MPC2O95563 127 aa11.44□□□□□ -0.58
CLN8-206ENST00000523237 LINC00336Q6ZUF6 198 aa11.44□□□□□ -0.58
CLN8-206ENST00000523237 MIR17HGQ75NE6 70 aa11.44□□□□□ -0.58
CLN8-206ENST00000523237 FAM167A-AS1Q96KT0 104 aa11.44□□□□□ -0.58
CLN8-206ENST00000523237 NOP10Q9NPE3 64 aaKnown RBP11.44□□□□□ -0.58
CLN8-206ENST00000523237 TRAV12-3A0A0B4J271 114 aa11.43□□□□□ -0.58
CLN8-206ENST00000523237 LGALS9BQ3B8N2 356 aa11.43□□□□□ -0.58
CLN8-206ENST00000523237 EXOC3-AS1Q8N2X6 119 aa11.43□□□□□ -0.58
CLN8-206ENST00000523237 LINC00477Q96M19 166 aa11.43□□□□□ -0.58
CLN8-206ENST00000523237 PYGO2Q9BRQ0 406 aa11.43□□□□□ -0.58
CLN8-206ENST00000523237 OR51M1Q9H341 326 aa11.43□□□□□ -0.58
CLN8-206ENST00000523237 HSPB11Q9Y547 144 aa11.43□□□□□ -0.58
CLN8-206ENST00000523237 DNAH6Q9C0G6 4158 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 M0R2N4 97 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 SLC25A5P05141 298 aaKnown RBP11.42□□□□□ -0.58
CLN8-206ENST00000523237 NBEAP1P0C6P0 100 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 ERCC8Q13216 396 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 ICAM4Q14773 271 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 PAXXQ9BUH6 204 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 FUT9Q9Y231 359 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 NACAE9PAV3 2078 aa11.42□□□□□ -0.58
CLN8-206ENST00000523237 C7orf71A4D174 169 aa11.41□□□□□ -0.58
CLN8-206ENST00000523237 SNURFLB1AK76 121 aa11.41□□□□□ -0.58
CLN8-206ENST00000523237 IFNA5P01569 189 aa11.41□□□□□ -0.58
CLN8-206ENST00000523237 RPL12P30050 165 aaKnown RBP11.41□□□□□ -0.58
CLN8-206ENST00000523237 FAM122CQ6P4D5 195 aa11.41□□□□□ -0.58
CLN8-206ENST00000523237 SCGB1C1Q8TD33 95 aa11.41□□□□□ -0.58
CLN8-206ENST00000523237 AGPAT4-IT1Q9H0P7 198 aa11.41□□□□□ -0.58
CLN8-206ENST00000523237 IGLV2-18A0A075B6J9 118 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms