RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 CKLFQ9UBR5 152 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 EPDR1Q9UM22 224 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 UTP11Q9Y3A2 253 aaKnown RBP0.38□□□□□ -2.35
CLK4-213ENST00000523013 ASB4Q9Y574 426 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 SOX21Q9Y651 276 aaPredicted RBP0.38□□□□□ -2.35
CLK4-213ENST00000523013 CACNA1BQ00975 2339 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 AFDNP55196 1824 aaKnown RBP0.38□□□□□ -2.35
CLK4-213ENST00000523013 PHIPQ8WWQ0 1821 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 WNK3Q9BYP7 1800 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 KIF13AQ9H1H9 1805 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 RICTORQ6R327 1708 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 DOT1LQ8TEK3 1739 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 ABCA3Q99758 1704 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 KIAA1551Q9HCM1 1747 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 MARF1Q9Y4F3 1742 aaKnown RBP0.38□□□□□ -2.35
CLK4-213ENST00000523013 LRP6O75581 1613 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 NHSL1Q5SYE7 1610 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 DISP2A7MBM2 1401 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 ZNF609O15014 1411 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 RIC1Q4ADV7 1423 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 ANKARQ7Z5J8 1434 aa0.38□□□□□ -2.35
CLK4-213ENST00000523013 OBSL1O75147 1896 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 LTN1O94822 1766 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 KDM3BQ7LBC6 1761 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 RBBP6Q7Z6E9 1792 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 UBR2Q8IWV8 1755 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 KIDINS220Q9ULH0 1771 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TNRC6CQ9HCJ0 1690 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 SSC5DA1L4H1 1573 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 DIP2BQ9P265 1576 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 PTPRMP28827 1452 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 C1orf167Q5SNV9 1468 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 ARHGEF10O15013 1369 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 DENND4CQ5VZ89 1909 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 FOCADQ5VW36 1801 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TAF1LQ8IZX4 1826 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 SPEF2Q9C093 1822 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 IGKV1D-42A0A075B6H8 117 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 IGKV3D-7A0A0C4DH55 119 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 IGKV3OR2-268A0A0C4DH90 116 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 A0A0G2JND7 137 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TRBV6-5A0A0K0K1A5 114 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 LOC105371267A0A1B0GV96 52 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 SMIM31A0A1B0GVY4 71 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 DUXBA0A1W2PPF3 345 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 FAM92AA1XBS5 289 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 FUOMA2VDF0 154 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TMEM212A6NML5 194 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 FAM25AB3EWG3 89 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 FAM25CB3EWG5 89 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 FAM25GB3EWG6 89 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 PPP5D1E7EU14 171 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 H0YJX3 145 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 J3QRK9 145 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 AIPO00170 330 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 SDCBPO00560 298 aaPredicted RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 KPNA4O00629 521 aaPredicted RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 HMGB3O15347 200 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 CYB5BO43169 146 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 OR2T1O43869 369 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 ORC5O43913 435 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 ATG12O94817 140 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 NDUFC2O95298 119 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 IFNA7P01567 189 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 IFNA14P01570 189 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 PAEPP09466 180 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 SMIM6P0DI80 62 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 IL7P13232 177 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 MIFP14174 115 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 IDO1P14902 403 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 GPX2P18283 190 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 OGNP20774 298 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 RPS3P23396 243 aaKnown RBP eCLIP0.37□□□□□ -2.35
CLK4-213ENST00000523013 S100A4P26447 101 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 FKBP2P26885 142 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 GLRXP35754 106 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 RPL35P42766 123 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 TCTAP57738 103 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 YPEL3P61236 119 aaPredicted RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 RHOBP62745 196 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 EIF5AP63241 154 aaKnown RBP0.37□□□□□ -2.35
CLK4-213ENST00000523013 RHEBQ15382 184 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 NEDD8Q15843 81 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 ARHGAP11BQ3KRB8 267 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 SCGB2B2Q4G0G5 96 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 CCDC58Q4VC31 144 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 C6orf52Q5T4I8 152 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TMEM78Q5T7P6 136 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 LYRM7Q5U5X0 104 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TRIQKQ629K1 86 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 C3orf33Q6P1S2 294 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 DPPA3Q6W0C5 159 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 ZNF826PQ6ZT77 177 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 C7orf65Q6ZTY9 151 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TRAPPC6BQ86SZ2 158 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 CROCCP2Q86T23 111 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 Q8IYB0 196 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 C4orf33Q8N1A6 199 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 TMEM86AQ8N2M4 240 aa0.37□□□□□ -2.35
CLK4-213ENST00000523013 STX19Q8N4C7 294 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms