RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 TRAV23DV6A0A075B6W5 121 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 A0A0J9YY99 117 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 C9orf170A2RU37 121 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 K7ERJ3 54 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 LYRM1O43325 122 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 APOA2P02652 100 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 MIR22HGQ0VDD5 57 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 FKBP1CQ5VVH2 108 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 HACD4Q5VWC8 232 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 IFT20Q8IY31 132 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 MALSU1Q96EH3 234 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 CEP19Q96LK0 163 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 GINS3Q9BRX5 216 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 FAM103A1Q9BTL3 118 aaKnown RBP0.11□□□□□ -2.39
PCM1-217ENST00000522998 MAP1LC3BQ9GZQ8 125 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 SPAG17Q6Q759 2223 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 CACNA1HO95180 2353 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 CD109Q6YHK3 1445 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 PIK3C2AO00443 1686 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 ADGBQ8N7X0 1667 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 ATG2AQ2TAZ0 1938 aa0.11□□□□□ -2.39
PCM1-217ENST00000522998 EIF3AQ14152 1382 aaKnown RBP0.1□□□□□ -2.39
PCM1-217ENST00000522998 ZNF727A8MUV8 499 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 C5orf67F2Z3F1 127 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 ATP5HO75947 161 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 IFNA1P01562 189 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 CCL4P13236 92 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 IDO1P14902 403 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 PDE6GP18545 87 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 ZNF137PP52743 207 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 HBBP68871 147 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 MSMO1Q15800 293 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 OCIAD2Q56VL3 154 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 LINC00299Q6ZSB3 139 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 LINC00269Q8N2A0 174 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 FAM216BQ8N7L0 139 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 PLEKHB2Q96CS7 222 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 MYO7AQ13402 2215 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 ABCA1O95477 2261 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 CAMSAP2Q08AD1 1489 aa0.1□□□□□ -2.39
PCM1-217ENST00000522998 RTL9Q8NET4 1388 aa0.09□□□□□ -2.39
PCM1-217ENST00000522998 IGSF10Q6WRI0 2623 aa0.09□□□□□ -2.39
PCM1-217ENST00000522998 ODAMA1E959 279 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 GPR31O00270 319 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 MFSD11O43934 449 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 CST7O76096 145 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 CSN2P05814 226 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 FXYD6P3P58550 94 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 MRPS15P82914 257 aaKnown RBP0.09□□□□□ -2.4
PCM1-217ENST00000522998 ESPL1Q14674 2120 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 SNCBQ16143 134 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 Q6ZQY7 126 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 OR13C6PQ8NH95 151 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 PLAC4Q8WY50 150 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 RMND5BQ96G75 393 aaPredicted RBP0.09□□□□□ -2.4
PCM1-217ENST00000522998 PBDC1Q9BVG4 233 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 OR2H1Q9GZK4 316 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 CST11Q9H112 138 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 SS18L2Q9UHA2 77 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 BOKQ9UMX3 212 aaPredicted RBP0.09□□□□□ -2.4
PCM1-217ENST00000522998 ANK2Q01484 3957 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 NUP210Q8TEM1 1887 aaPredicted RBP0.09□□□□□ -2.4
PCM1-217ENST00000522998 LRP1Q07954 4544 aaKnown RBP0.09□□□□□ -2.4
PCM1-217ENST00000522998 SYNE2Q8WXH0 6885 aaKnown RBP0.09□□□□□ -2.4
PCM1-217ENST00000522998 LOC285556D6RIA3 1793 aa0.09□□□□□ -2.4
PCM1-217ENST00000522998 TRPM7Q96QT4 1865 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 A0A096LPI6 279 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 NUPR2A6NF83 97 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 PIAS1O75925 651 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 IGHV3-30P01768 117 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 IGHV3-30-5P0DP03 117 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 RPL35P42766 123 aaKnown RBP0.08□□□□□ -2.4
PCM1-217ENST00000522998 SPINT3P49223 89 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 GNG3P63215 75 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 RPL19P84098 196 aaKnown RBP0.08□□□□□ -2.4
PCM1-217ENST00000522998 RTL8BQ17RB0 113 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 C6orf52Q5T4I8 152 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 TMED4Q7Z7H5 227 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 C10orf111Q8N326 155 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 CCL4L1Q8NHW4 92 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 CARD19Q96LW7 228 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 CCL19Q99731 98 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 ZFYVE26Q68DK2 2539 aa0.08□□□□□ -2.4
PCM1-217ENST00000522998 ANK1P16157 1881 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 ANKRD31Q8N7Z5 1873 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 DMBT1Q9UGM3 2413 aaPredicted RBP0.07□□□□□ -2.4
PCM1-217ENST00000522998 KIAA1107Q9UPP5 1409 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 PPP1R2P41236 205 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 DIAPH2-AS1Q14236 149 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 POU6F1Q14863 301 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 LTC4SQ16873 150 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 C10orf99Q6UWK7 81 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 ZCCHC23Q6ZST2 131 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 LYG2Q86SG7 212 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 PRR15Q8IV56 129 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 LIMD2Q9BT23 127 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 IL20Q9NYY1 176 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 LAMTOR3Q9UHA4 124 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 KIAA1549LQ6ZVL6 1849 aa0.07□□□□□ -2.4
PCM1-217ENST00000522998 ASXL3Q9C0F0 2248 aa0.07□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms