RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 TSC22D2O75157 780 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 RLN2P04090 185 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 MIC13Q5XKP0 118 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 S100A7AQ86SG5 101 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 TMPRSS5Q9H3S3 457 aa10.7□□□□□ -0.7
MRPS28-209ENST00000522987 NAP1L6A6NFF2 107 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 FNDC10F2Z333 226 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 L7N2F9 121 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 CST7O76096 145 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 CT45A10P0DMU9 189 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 CXCL2P19875 107 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 M6PRP20645 277 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 BCAP31P51572 246 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 VAMP2P63027 116 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 ERCC8Q13216 396 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 ESRGQ1W209 222 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 Q6ZTI0 123 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 RXFP4Q8TDU9 374 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 SDHCQ99643 169 aaPredicted RBP10.69□□□□□ -0.7
MRPS28-209ENST00000522987 ZNF586Q9NXT0 402 aa10.69□□□□□ -0.7
MRPS28-209ENST00000522987 LRP1BQ9NZR2 4599 aa10.68□□□□□ -0.7
MRPS28-209ENST00000522987 CDK2AP2O75956 126 aa10.68□□□□□ -0.7
MRPS28-209ENST00000522987 IGLC2P0DOY2 106 aa10.68□□□□□ -0.7
MRPS28-209ENST00000522987 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
MRPS28-209ENST00000522987 KRTAP10-2P60368 255 aa10.68□□□□□ -0.7
MRPS28-209ENST00000522987 NRARPQ7Z6K4 114 aa10.68□□□□□ -0.7
MRPS28-209ENST00000522987 FAM24AA6NFZ4 105 aa10.67□□□□□ -0.7
MRPS28-209ENST00000522987 CAMLGP49069 296 aa10.67□□□□□ -0.7
MRPS28-209ENST00000522987 CAV2P51636 162 aa10.67□□□□□ -0.7
MRPS28-209ENST00000522987 TAS2R30P59541 319 aa10.67□□□□□ -0.7
MRPS28-209ENST00000522987 PXDC1Q5TGL8 231 aa10.67□□□□□ -0.7
MRPS28-209ENST00000522987 LINC00612Q8N6U2 182 aa10.67□□□□□ -0.7
MRPS28-209ENST00000522987 SAT2Q96F10 170 aaPredicted RBP10.67□□□□□ -0.7
MRPS28-209ENST00000522987 RBM38Q9H0Z9 239 aaKnown RBP10.67□□□□□ -0.7
MRPS28-209ENST00000522987 PXMP4Q9Y6I8 212 aa10.67□□□□□ -0.7
MRPS28-209ENST00000522987 M0R3E3 92 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 LEPP41159 167 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 ZNF846Q147U1 533 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 ZNF431Q8TF32 576 aaPredicted RBP10.66□□□□□ -0.7
MRPS28-209ENST00000522987 MITD1Q8WV92 249 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 C20orf144Q9BQM9 153 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 SEC22CQ9BRL7 303 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 DNAJC4Q9NNZ3 241 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 GSN-AS1Q9NRJ2 163 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 RNF24Q9Y225 148 aa10.66□□□□□ -0.7
MRPS28-209ENST00000522987 TRAV6A0A075B6T7 132 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 UBE2L5PA0A1B0GUS4 154 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 C5orf51A6NDU8 294 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 CENPXA8MT69 81 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 NPIPB6E9PJ23 425 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 IL7P13232 177 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 BTN1A1Q13410 526 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 TTC32Q5I0X7 151 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 C20orf85Q9H1P6 137 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 Q9H3A6 140 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 SCRT2Q9NQ03 307 aa10.65□□□□□ -0.7
MRPS28-209ENST00000522987 TRGV2A0A075B6R0 118 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 TRGV1A0A0A0MS02 117 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 IGHV3-53P01767 116 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 S100A10P60903 97 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 BAXQ07812 192 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 CD300CQ08708 224 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 Q6ZRG5 221 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 BLNKQ8WV28 456 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 VSIG2Q96IQ7 327 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 GGACTQ9BVM4 153 aa10.64□□□□□ -0.71
MRPS28-209ENST00000522987 MRPS16Q9Y3D3 137 aaKnown RBP10.64□□□□□ -0.71
MRPS28-209ENST00000522987 APOBP04114 4563 aaKnown RBP10.63□□□□□ -0.71
MRPS28-209ENST00000522987 A0A096LPF7 62 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 C7orf71A4D174 169 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 PYYP10082 97 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
MRPS28-209ENST00000522987 RAB31Q13636 194 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 Q6ZQT7 251 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 PYGO2Q9BRQ0 406 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 UQCC1Q9NVA1 299 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 WDR83OSQ9Y284 106 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 KLF12Q9Y4X4 402 aa10.63□□□□□ -0.71
MRPS28-209ENST00000522987 IGSF23A1L1A6 192 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 PLA2G10O15496 165 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 LINC00315P59091 139 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 Q8N1X5 172 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 EXOC3-AS1Q8N2X6 119 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 OR1L4Q8NGR5 311 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 C11orf1Q9H5F2 150 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 SLC39A9Q9NUM3 307 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 FUT9Q9Y231 359 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 TNFRSF18Q9Y5U5 241 aa10.62□□□□□ -0.71
MRPS28-209ENST00000522987 IGKV2-40A0A087WW87 121 aaPredicted RBP10.61□□□□□ -0.71
MRPS28-209ENST00000522987 NDUFB4O95168 129 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 IGKV2D-40P01614 121 aaPredicted RBP10.61□□□□□ -0.71
MRPS28-209ENST00000522987 FGF7P21781 194 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 GCSAMLQ5JQS6 135 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 C11orf72Q8NBR9 251 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 ZNF503Q96F45 646 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 ODF3Q96PU9 254 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 UPK3BQ9BT76 320 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 AGPAT4-IT1Q9H0P7 198 aa10.61□□□□□ -0.71
MRPS28-209ENST00000522987 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
MRPS28-209ENST00000522987 TP53TG3Q9ULZ0 132 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms