RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GPN1Q9HCN4 374 aaPredicted RBP14.6□□□□□ -0.07
SDCBP-209ENST00000522243 ZNF586Q9NXT0 402 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 PXMP4Q9Y6I8 212 aa14.6□□□□□ -0.07
SDCBP-209ENST00000522243 F5H768 121 aa14.59□□□□□ -0.07
SDCBP-209ENST00000522243 HBG1P69891 147 aa14.59□□□□□ -0.07
SDCBP-209ENST00000522243 HBG2P69892 147 aa14.59□□□□□ -0.07
SDCBP-209ENST00000522243 C16orf74Q96GX8 76 aa14.59□□□□□ -0.07
SDCBP-209ENST00000522243 NACAE9PAV3 2078 aa14.59□□□□□ -0.07
SDCBP-209ENST00000522243 RTL8CO15255 209 aa14.58□□□□□ -0.08
SDCBP-209ENST00000522243 LGALS9BQ3B8N2 356 aa14.58□□□□□ -0.08
SDCBP-209ENST00000522243 ENKURQ8TC29 256 aa14.58□□□□□ -0.08
SDCBP-209ENST00000522243 H7BYZ3 331 aa14.57□□□□□ -0.08
SDCBP-209ENST00000522243 NHLH2Q02577 135 aa14.57□□□□□ -0.08
SDCBP-209ENST00000522243 ATP6V1FQ16864 119 aa14.57□□□□□ -0.08
SDCBP-209ENST00000522243 RNF212Q495C1 297 aa14.57□□□□□ -0.08
SDCBP-209ENST00000522243 GFI1BQ5VTD9 330 aa14.57□□□□□ -0.08
SDCBP-209ENST00000522243 NOP10Q9NPE3 64 aaKnown RBP14.57□□□□□ -0.08
SDCBP-209ENST00000522243 PRSS29PA6NIE9 313 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 UPK1BO75841 260 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 ATP5G1P05496 136 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 CT45A10P0DMU9 189 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 ATP5G3P48201 142 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 GUK1Q16774 197 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 LRRC37A5PQ49AS3 106 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 C15orf53Q8NAA6 179 aa14.56□□□□□ -0.08
SDCBP-209ENST00000522243 RNASE8Q8TDE3 154 aaKnown RBP14.56□□□□□ -0.08
SDCBP-209ENST00000522243 TIMM8BQ9Y5J9 83 aaPredicted RBP14.56□□□□□ -0.08
SDCBP-209ENST00000522243 CBY3A6NI87 242 aa14.55□□□□□ -0.08
SDCBP-209ENST00000522243 IFITM3Q01628 133 aa14.55□□□□□ -0.08
SDCBP-209ENST00000522243 GCSAMLQ5JQS6 135 aa14.55□□□□□ -0.08
SDCBP-209ENST00000522243 ZNF493Q6ZR52 646 aa14.55□□□□□ -0.08
SDCBP-209ENST00000522243 TMEM263Q8WUH6 116 aaKnown RBP14.55□□□□□ -0.08
SDCBP-209ENST00000522243 CHAC2Q8WUX2 184 aa14.55□□□□□ -0.08
SDCBP-209ENST00000522243 C20orf144Q9BQM9 153 aa14.55□□□□□ -0.08
SDCBP-209ENST00000522243 A0A1B0GVY2 172 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 M0R3E3 92 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 NUDT3O95989 172 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 PYYP10082 97 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 Q6ZR54 194 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 OR5C1Q8NGR4 320 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 THAP6Q8TBB0 222 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 ATG101Q9BSB4 218 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 NPCDR1Q9BY65 106 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 OR5AC2Q9NZP5 309 aa14.54□□□□□ -0.08
SDCBP-209ENST00000522243 TRBV19A0A075B6N1 114 aa14.53□□□□□ -0.08
SDCBP-209ENST00000522243 TRAV12-3A0A0B4J271 114 aa14.53□□□□□ -0.08
SDCBP-209ENST00000522243 NPIPB6E9PJ23 425 aa14.53□□□□□ -0.08
SDCBP-209ENST00000522243 ERCC8Q13216 396 aa14.53□□□□□ -0.08
SDCBP-209ENST00000522243 CCDC28AQ8IWP9 274 aa14.53□□□□□ -0.08
SDCBP-209ENST00000522243 BLNKQ8WV28 456 aa14.53□□□□□ -0.08
SDCBP-209ENST00000522243 E5RGE8 158 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 H0YIZ8 118 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 ZNF253O75346 499 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 MPDU1O75352 247 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 NDUFB4O95168 129 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 RLN2P04090 185 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 HIST1H1EP10412 219 aaKnown RBP14.52□□□□□ -0.09
SDCBP-209ENST00000522243 LEPP41159 167 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 CLINT1Q14677 625 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 TMEM14CQ9P0S9 112 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 TIMM9Q9Y5J7 89 aa14.52□□□□□ -0.09
SDCBP-209ENST00000522243 A6NHS1 94 aa14.51□□□□□ -0.09
SDCBP-209ENST00000522243 INMT-MINDY4F8WBC2 141 aa14.51□□□□□ -0.09
SDCBP-209ENST00000522243 EXOC3-AS1Q8N2X6 119 aa14.51□□□□□ -0.09
SDCBP-209ENST00000522243 NMES1Q9C002 83 aa14.51□□□□□ -0.09
SDCBP-209ENST00000522243 SLC25A31Q9H0C2 315 aa14.51□□□□□ -0.09
SDCBP-209ENST00000522243 MIR17HGQ75NE6 70 aa14.5□□□□□ -0.09
SDCBP-209ENST00000522243 RNF141Q8WVD5 230 aa14.5□□□□□ -0.09
SDCBP-209ENST00000522243 MRPL53Q96EL3 112 aaKnown RBP14.5□□□□□ -0.09
SDCBP-209ENST00000522243 ODF3Q96PU9 254 aa14.5□□□□□ -0.09
SDCBP-209ENST00000522243 SLC25A2Q9BXI2 301 aa14.5□□□□□ -0.09
SDCBP-209ENST00000522243 GAGE12BA1L429 117 aa14.49□□□□□ -0.09
SDCBP-209ENST00000522243 GAGE7O76087 117 aa14.49□□□□□ -0.09
SDCBP-209ENST00000522243 GAGE12FP0CL80 117 aa14.49□□□□□ -0.09
SDCBP-209ENST00000522243 GAGE12GP0CL81 117 aa14.49□□□□□ -0.09
SDCBP-209ENST00000522243 GAGE12IP0CL82 117 aa14.49□□□□□ -0.09
SDCBP-209ENST00000522243 OR5I1Q13606 314 aa14.49□□□□□ -0.09
SDCBP-209ENST00000522243 SNURFLB1AK76 121 aa14.48□□□□□ -0.09
SDCBP-209ENST00000522243 PRAF2O60831 178 aa14.48□□□□□ -0.09
SDCBP-209ENST00000522243 FAM167A-AS1Q96KT0 104 aa14.48□□□□□ -0.09
SDCBP-209ENST00000522243 AGPAT4-IT1Q9H0P7 198 aa14.48□□□□□ -0.09
SDCBP-209ENST00000522243 PTTG2Q9NZH5 202 aa14.48□□□□□ -0.09
SDCBP-209ENST00000522243 PRELID1Q9Y255 219 aa14.48□□□□□ -0.09
SDCBP-209ENST00000522243 SLC25A5P05141 298 aaKnown RBP14.47□□□□□ -0.09
SDCBP-209ENST00000522243 PDE6HQ13956 83 aa14.47□□□□□ -0.09
SDCBP-209ENST00000522243 ICAM4Q14773 271 aa14.47□□□□□ -0.09
SDCBP-209ENST00000522243 LINC00612Q8N6U2 182 aa14.47□□□□□ -0.09
SDCBP-209ENST00000522243 PYGO2Q9BRQ0 406 aa14.47□□□□□ -0.09
SDCBP-209ENST00000522243 WDR61Q9GZS3 305 aaKnown RBP14.47□□□□□ -0.09
SDCBP-209ENST00000522243 AAMDCQ9H7C9 122 aa14.47□□□□□ -0.09
SDCBP-209ENST00000522243 C7orf71A4D174 169 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 H2BFSP57053 126 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 FAM3BP58499 235 aaPredicted RBP14.46□□□□□ -0.09
SDCBP-209ENST00000522243 CYCSP99999 105 aaKnown RBP14.46□□□□□ -0.09
SDCBP-209ENST00000522243 CD300CQ08708 224 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 BTN1A1Q13410 526 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 C1orf134Q5TEV5 83 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 FAM122CQ6P4D5 195 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 PPP1R1CQ8WVI7 109 aa14.46□□□□□ -0.09
SDCBP-209ENST00000522243 LINC00477Q96M19 166 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms