RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 RPP30P78346 268 aaKnown RBP8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 CYP2G1PQ6ZSU1 146 aa8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 TMEM229BQ8NBD8 167 aa8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 TXNDC17Q9BRA2 123 aa8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 CHAC1Q9BUX1 264 aa8.7□□□□□ -1.02
SRGAP3-212ENST00000520860 C7orf71A4D174 169 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 FAM25AB3EWG3 89 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 FAM25CB3EWG5 89 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 FAM25GB3EWG6 89 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 LINC00869P0C866 280 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 CT45A10P0DMU9 189 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 LSM3P62310 102 aaKnown RBP8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 ASAH1Q13510 395 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 NEDD8Q15843 81 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 ACOT6Q3I5F7 207 aaPredicted RBP8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 TDRG1Q3Y452 100 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 IBA57Q5T440 356 aaKnown RBP8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 TEPPQ6URK8 271 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 ACOT7LQ6ZUV0 252 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 LYZL2Q7Z4W2 148 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 TM2D2Q9BX73 214 aa8.69□□□□□ -1.02
SRGAP3-212ENST00000520860 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 SMCO3A2RU48 225 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 PRSS46E5RG02 174 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 MRPS12O15235 138 aaKnown RBP8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 HPGDSO60760 199 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 MED6O75586 246 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 SNRPCP09234 159 aaKnown RBP8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 ASIPP42127 132 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 PLP1P60201 277 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 WFDC2Q14508 124 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 FAAP20Q6NZ36 180 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 CIB3Q96Q77 187 aaPredicted RBP8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 DNAJC4Q9NNZ3 241 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 GPR132Q9UNW8 380 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 LRP2P98164 4655 aa8.68□□□□□ -1.02
SRGAP3-212ENST00000520860 DISC1C4P0D8 188 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 C9JCJ5 164 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 IGLV2-8P01709 118 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 TNFSF8P32971 234 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 PPT1P50897 306 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 RPL37AP61513 92 aaKnown RBP8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 SELENOTP62341 195 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 LINC01620Q4KN68 170 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 CIRBP-AS1Q8TBR5 109 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 BLNKQ8WV28 456 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 BOLA1Q9Y3E2 137 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 PXMP4Q9Y6I8 212 aa8.67□□□□□ -1.02
SRGAP3-212ENST00000520860 SLC17A3O00476 420 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 RGS13O14921 159 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 LECT2O14960 151 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 MPDU1O75352 247 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 SFTA3P0C7M3 94 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 MT1HL1P0DM35 61 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 SRPXP78539 464 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 MORN5Q5VZ52 161 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 SH2D6Q7Z4S9 175 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 BPIFA4PQ86YQ2 179 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 ARPC5LQ9BPX5 153 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 ARL6Q9H0F7 186 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 ARV1Q9H2C2 271 aa8.66□□□□□ -1.02
SRGAP3-212ENST00000520860 TRAV8-6A0A0B4J262 113 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 PIGBOS1A0A0B4J2F0 54 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 H3BTX0 84 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 WRBO00258 174 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 ANXA3P12429 323 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 TIRAPP58753 221 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 BTN1A1Q13410 526 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 SPANXN5Q5MJ07 72 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 IQCF2Q8IXL9 164 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 OR51S1Q8NGJ8 323 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 TMEM37Q8WXS4 190 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 SLC25A31Q9H0C2 315 aa8.65□□□□□ -1.02
SRGAP3-212ENST00000520860 RBFOX3A6NFN3 312 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 KLLNB2CW77 178 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 PITX3O75364 302 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 IGHV3-30P01768 117 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 IGHV3-33P01772 117 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 IGHV3-30-3P0DP02 117 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 IGHV3-30-5P0DP03 117 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 CD300CQ08708 224 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 LAGE3Q14657 143 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 NHLRC2Q8NBF2 726 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 C15orf40Q8WUR7 153 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 ZNF479Q96JC4 524 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 TP53TG3Q9ULZ0 132 aa8.64□□□□□ -1.03
SRGAP3-212ENST00000520860 H3BP45 60 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 SYNGR2O43760 224 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 HNRNPA3P51991 378 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 OR10J3Q5JRS4 329 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 PXDC1Q5TGL8 231 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 MZT2AQ6P582 158 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 PATE2Q6UY27 113 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 LINC00305Q7Z4B0 112 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 PRRT1Q99946 306 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 EXTL2Q9UBQ6 330 aa8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 STRAPQ9Y3F4 350 aaKnown RBP8.63□□□□□ -1.03
SRGAP3-212ENST00000520860 PKHD1L1Q86WI1 4243 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms