RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ADAMTSL5Q6ZMM2 481 aa10.15□□□□□ -0.78
TRAPPC9-208ENST00000520857 FAM169BQ8N8A8 192 aa10.15□□□□□ -0.78
TRAPPC9-208ENST00000520857 HIF1ANQ9NWT6 349 aa10.15□□□□□ -0.78
TRAPPC9-208ENST00000520857 IGHV3OR16-13A0A075B7E8 117 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGHV3-74A0A0B4J1X5 117 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 MBD3L4A6NDZ8 208 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 MBD3L3A6NE82 208 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 MBD3L5A6NJ08 208 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 NPIPB6E9PJ23 425 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 CDX4O14627 284 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGKV1-17P01599 117 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGLV2-11P01706 119 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 APOBEC3AP31941 199 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 ZC2HC1BQ5TFG8 222 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 TEX36Q5VZQ5 186 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 CLEC2AQ6UVW9 174 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 MBD3L2Q8NHZ7 208 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 HIST1H4GQ99525 98 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 SHANK2-AS3Q9BTD1 123 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 CHAC1Q9BUX1 264 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 CRYGCP07315 174 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 ADIPOQQ15848 244 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 SFTA2Q6UW10 78 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 MSRB1Q9NZV6 116 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGHV1-3A0A0C4DH29 117 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 INS-IGF2F8WCM5 200 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 LOXP28300 417 aaPredicted RBP10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 LCNL1Q6ZST4 164 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 CTSZQ9UBR2 303 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 ASPMQ8IZT6 3477 aa10.14□□□□□ -0.79
TRAPPC9-208ENST00000520857 CIDEAO60543 219 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 CRIP1P50238 77 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 SIGLEC15Q6ZMC9 328 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 J3KRW8 73 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 ASCL5Q7RTU5 278 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 SIGMAR1Q99720 223 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 SPOCK3Q9BQ16 436 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 FGF6P10767 208 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 BMI1P35226 326 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 LINC00574Q9H8X3 128 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 ARHGAP32A7KAX9 2087 aa10.13□□□□□ -0.79
TRAPPC9-208ENST00000520857 C19orf67A6NJJ6 358 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGKCP01834 107 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 ETDBQ3ZM63 59 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 AMTNQ6UX39 209 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 MYOZ3Q8TDC0 251 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 FAM215AQ9Y5M1 114 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 TSSC4Q9Y5U2 329 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 GATA1P15976 413 aaPredicted RBP10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 AZU1P20160 251 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 UFSP1Q6NVU6 142 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 PRSS33Q8NF86 280 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 ZNF479Q96JC4 524 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 TMEM14CQ9P0S9 112 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGHV3-66A0A0C4DH42 116 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 PRRG2O14669 202 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 NDUFA3O95167 84 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 RBPJQ06330 500 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 TMEM158Q8WZ71 300 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 DCHS1Q96JQ0 3298 aa10.12□□□□□ -0.79
TRAPPC9-208ENST00000520857 ANKHD1Q8IWZ3 2542 aaKnown RBP10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 A0A096LNJ9 63 aa10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 CREBBPQ92793 2442 aa10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 TIMM23O14925 209 aa10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 ARL3P36405 182 aa10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 TMEM155Q4W5P6 130 aa10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 EGR2P11161 476 aaPredicted RBP10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 HLA-DMBP28068 263 aa10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 RALYQ9UKM9 306 aaKnown RBP10.11□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGKV2D-26A0A0A0MRZ7 120 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 IGHV3-49A0A0A0MS15 119 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 TRAV40A0A0B4J280 105 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 H3BMG7 143 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 DPM2O94777 84 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 RPL7P18124 248 aaKnown RBP10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 MFAP4P55083 255 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 PVRIGQ6DKI7 326 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 SH2D6Q7Z4S9 175 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 MGAQ8IWI9 3026 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 H3BRN7 92 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 RAI1Q7Z5J4 1906 aaPredicted RBP10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 TMEM8BA6NDV4 472 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 SCGB2A1O75556 95 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 TTC9CQ8N5M4 171 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 LINC00311Q8N616 119 aa10.1□□□□□ -0.79
TRAPPC9-208ENST00000520857 MUC3AQ02505 3323 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 ZFHX4Q86UP3 3567 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 A0A1B0GWB2 263 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 WFDC2Q14508 124 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 VGLL1Q99990 258 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 BDP1A6H8Y1 2624 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 AGRNO00468 2067 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 TEX22C9J3V5 150 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 I3L2K1 104 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 TNFRSF6BO95407 300 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 ARPC1AQ92747 370 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 RNASE6Q93091 150 aaKnown RBP10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 TRBV25-1A0A075B6N4 114 aa10.09□□□□□ -0.79
TRAPPC9-208ENST00000520857 BUB1B-PAK6H3BSN5 160 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms