RNA–Protein interactions for RNA: ENST00000520846.1

MSR1-211, Transcript of macrophage scavenger receptor 1, human

TSL 4

Gene MSR1, Length 373 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSR1-211	ENST00000520846	LINC00299	Q6ZSB3	139 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	TMED4	Q7Z7H5	227 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	FAM216B	Q8N7L0	139 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	SMR3A	Q99954	134 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	RTL8A	Q9BWD3	113 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	BOK	Q9UMX3	212 aa	Predicted RBP	0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	PTPRD	P23468	1912 aa		0.34	□□□□□ -2.36
MSR1-211	ENST00000520846	PIK3C2A	O00443	1686 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	FRAS1	Q86XX4	4008 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	FRMPD1	Q5SYB0	1578 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	MUC5AC	P98088	5654 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	ZNF727	A8MUV8	499 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	CST7	O76096	145 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	RPL35	P42766	123 aa	Known RBP	0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	SPINT3	P49223	89 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	ZNF137P	P52743	207 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	SPINK7	P58062	85 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	MIR22HG	Q0VDD5	57 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	POU6F1	Q14863	301 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	OCIAD2	Q56VL3	154 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	FOXI2	Q6ZQN5	318 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	PHF5A	Q7RTV0	110 aa	Known RBP	0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	CROCCP2	Q86T23	111 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	NEK7	Q8TDX7	302 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	OR2H1	Q9GZK4	316 aa		0.33	□□□□□ -2.36
MSR1-211	ENST00000520846	EIF3A	Q14152	1382 aa	Known RBP	0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	KDELR1	P24390	212 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	FXYD4	P59646	89 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	GNG3	P63215	75 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	BASP1	P80723	227 aa	Known RBP	0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	RTL8B	Q17RB0	113 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	C6orf52	Q5T4I8	152 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846		Q6ZQY7	126 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	PLEKHB2	Q96CS7	222 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	CST11	Q9H112	138 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	JPT1	Q9UK76	154 aa		0.32	□□□□□ -2.36
MSR1-211	ENST00000520846	MFSD11	O43934	449 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846	CSN2	P05814	226 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846	CCL4	P13236	92 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846	DIAPH2-AS1	Q14236	149 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846	VMA21	Q3ZAQ7	101 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846	FKBP1C	Q5VVH2	108 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846	AP3S1	Q92572	193 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846	RTL9	Q8NET4	1388 aa		0.31	□□□□□ -2.36
MSR1-211	ENST00000520846		A0A0J9YY99	117 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	PIAS1	O75925	651 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	MT-ND6	P03923	174 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	TCTA	P57738	103 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846		Q86TA4	180 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	SMIM20	Q8N5G0	67 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	MCEE	Q96PE7	176 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	LIMD2	Q9BT23	127 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	EFCAB11	Q9BUY7	163 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	LAMTOR3	Q9UHA4	124 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	TPRKB	Q9Y3C4	175 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	NAV2	Q8IVL1	2488 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	APC	P25054	2843 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	ADGB	Q8N7X0	1667 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	KIAA1107	Q9UPP5	1409 aa		0.3	□□□□□ -2.36
MSR1-211	ENST00000520846	MYH3	P11055	1940 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846		H3BQV1	296 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	PDE6G	P18545	87 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	TAS2R41	P59536	307 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	RPL37A	P61513	92 aa	Known RBP	0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	LTC4S	Q16873	150 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	LYG2	Q86SG7	212 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	LINC00269	Q8N2A0	174 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	OR4B1	Q8NGF8	309 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	RMND5B	Q96G75	393 aa	Predicted RBP	0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	OR4C12	Q96R67	309 aa		0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	ASH1L	Q9NR48	2969 aa	Known RBP	0.29	□□□□□ -2.36
MSR1-211	ENST00000520846	KMT2D	O14686	5537 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	KPNA4	O00629	521 aa	Predicted RBP	0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	FABP4	P15090	132 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	MRPS36	P82909	103 aa	Known RBP	0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	ZCCHC23	Q6ZST2	131 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	C10orf111	Q8N326	155 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	STX19	Q8N4C7	294 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	GRPEL2	Q8TAA5	225 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	BORCS8	Q96FH0	119 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	CCL19	Q99731	98 aa		0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	FAM103A1	Q9BTL3	118 aa	Known RBP	0.28	□□□□□ -2.36
MSR1-211	ENST00000520846	GLRX	P35754	106 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	NEDD8	Q15843	81 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	PRR15	Q8IV56	129 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	FAM24B	Q8N5W8	94 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	C5orf17	Q8NAS9	161 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	TSKU	Q8WUA8	353 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	PLAC4	Q8WY50	150 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	BIN3	Q9NQY0	253 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	OTOR	Q9NRC9	128 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	MED11	Q9P086	117 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	NAT8B	Q9UHF3	227 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	UFC1	Q9Y3C8	167 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	NUBP2	Q9Y5Y2	271 aa		0.27	□□□□□ -2.37
MSR1-211	ENST00000520846	YTHDC2	Q9H6S0	1430 aa	Known RBP	0.27	□□□□□ -2.37
MSR1-211	ENST00000520846		A6NN06	94 aa		0.26	□□□□□ -2.37
MSR1-211	ENST00000520846	C5orf58	C9J3I9	102 aa		0.26	□□□□□ -2.37
MSR1-211	ENST00000520846	KRTAP2-3	P0C7H8	128 aa		0.26	□□□□□ -2.37
MSR1-211	ENST00000520846	CASC2	Q6XLA1	102 aa		0.26	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms