RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 TMEM14CQ9P0S9 112 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 CENPVL3A0A0U1RRI6 287 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 B4DSR2 109 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 F5H697 171 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 LY6LH3BQJ8 138 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 MSMBP08118 114 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 BTF3P20290 206 aaKnown RBP7.98□□□□□ -1.13
MCF2-209ENST00000520602 FAM106AQ4KMX7 169 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 LYPD1Q8N2G4 141 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 C18orf32Q8TCD1 76 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 ZC2HC1AQ96GY0 325 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 ZNF414Q96IQ9 312 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 ZNF462Q96JM2 2506 aa7.98□□□□□ -1.13
MCF2-209ENST00000520602 RPS20P60866 119 aaKnown RBP7.97□□□□□ -1.13
MCF2-209ENST00000520602 Q0VG73 95 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 Q6ZWC4 215 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 DPF1Q92782 380 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 PRELID3AQ96N28 172 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 PRORYQ9H606 182 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 MRPL27Q9P0M9 148 aaKnown RBP7.97□□□□□ -1.13
MCF2-209ENST00000520602 SH2D1AO60880 128 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 NDUFA3O95167 84 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 LINC00614P0C842 121 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 CTAG1AP78358 180 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 COA6Q5JTJ3 125 aaKnown RBP7.97□□□□□ -1.13
MCF2-209ENST00000520602 TMEM70Q9BUB7 260 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 SIRPDQ9H106 197 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 PRDM13Q9H4Q3 707 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 MAP1AP78559 2803 aaPredicted RBP7.97□□□□□ -1.13
MCF2-209ENST00000520602 CFAP47Q6ZTR5 3102 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 IGHV4-30-2A0A087WSY4 118 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 IGLV2-8P01709 118 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 MGPP08493 103 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 SMIM17P0DL12 118 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 LMO4P61968 165 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 BCL6BQ8N143 479 aaPredicted RBP7.97□□□□□ -1.13
MCF2-209ENST00000520602 WFDC12Q8WWY7 111 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 NDUFAF3Q9BU61 184 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 WNK1Q9H4A3 2382 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 LINC01548A6NM66 108 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 CTSGP08311 255 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 PLP1P60201 277 aa7.97□□□□□ -1.13
MCF2-209ENST00000520602 SORL1Q92673 2214 aa7.96□□□□□ -1.13
MCF2-209ENST00000520602 A0A0G2JLM5 398 aa7.96□□□□□ -1.13
MCF2-209ENST00000520602 LTAP01374 205 aa7.96□□□□□ -1.13
MCF2-209ENST00000520602 IGHV4-38-2P0DP08 117 aa7.96□□□□□ -1.13
MCF2-209ENST00000520602 SLC50A1Q9BRV3 221 aa7.96□□□□□ -1.13
MCF2-209ENST00000520602 MCRIP2Q9BUT9 160 aaKnown RBP7.96□□□□□ -1.13
MCF2-209ENST00000520602 PSMB11A5LHX3 300 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 ODF3BA8MYP8 253 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 SMAD7O15105 426 aaKnown RBP7.96□□□□□ -1.14
MCF2-209ENST00000520602 PDE6HQ13956 83 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 RASL11AQ6T310 242 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 SIGLEC15Q6ZMC9 328 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 TRBV7-1A0A0A6YYK4 115 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 M0R381 172 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 FXYD7P58549 80 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 FBLN7Q53RD9 439 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 PIP4P2Q8N4L2 257 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 OR10AG1Q8NH19 301 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 C18orf15Q96N68 181 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 VGLL1Q99990 258 aa7.96□□□□□ -1.14
MCF2-209ENST00000520602 NCR2O95944 276 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 HINT1P49773 126 aaPredicted RBP7.95□□□□□ -1.14
MCF2-209ENST00000520602 SCGB2A2Q13296 93 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 Q6AWC8 147 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 NPFFR1Q9GZQ6 430 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 ZNF492Q9P255 531 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 CENPEQ02224 2701 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 TMEM213A2RRL7 107 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 OR4C46A6NHA9 309 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 TCAPO15273 167 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 LINC00322Q6ZN03 302 aaPredicted RBP7.95□□□□□ -1.14
MCF2-209ENST00000520602 ORMDL3Q8N138 153 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 OR4X2Q8NGF9 303 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 UQCR10Q9UDW1 63 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 POLR3KQ9Y2Y1 108 aaPredicted RBP7.95□□□□□ -1.14
MCF2-209ENST00000520602 ABCA12Q86UK0 2595 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 RNF223E7ERA6 249 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 M0QZK8 103 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 AMN1Q8IY45 258 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 TMEM75Q8N9X5 138 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 SMIM12Q96EX1 92 aa7.95□□□□□ -1.14
MCF2-209ENST00000520602 ASPMQ8IZT6 3477 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 ATMQ13315 3056 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 A8MWP6 167 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 ID1P41134 155 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 ALKBH7Q9BT30 221 aaPredicted RBP7.94□□□□□ -1.14
MCF2-209ENST00000520602 PHLDA3Q9Y5J5 127 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 D6R8Y8 96 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 FSTL3O95633 263 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 BLCAPP62952 87 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 C1orf194Q5T5A4 169 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 DSCAML1Q8TD84 2053 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 SMKR1H3BMG3 65 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 NDUFS8O00217 210 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 ZNF25P17030 456 aaPredicted RBP7.94□□□□□ -1.14
MCF2-209ENST00000520602 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.94□□□□□ -1.14
MCF2-209ENST00000520602 PRR25Q96S07 402 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms