RNA–Protein interactions for RNA: ENST00000520579.5

PDGFRB-207, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 1 (best)

Gene PDGFRB, Length 3,860 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-207ENST00000520579 C9JAW5 83 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 KLF17Q5JT82 389 aaPredicted RBP8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 RUSC1-AS1Q66K80 236 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 TMEM160Q9NX00 188 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 HIGD1AQ9Y241 93 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 LY96Q9Y6Y9 160 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 M0R3E3 92 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 RBPMS2Q6ZRY4 209 aaKnown RBP8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 FAM167A-AS1Q96KT0 104 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 FAM162BQ5T6X4 162 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 IGFL4Q6B9Z1 124 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 PATE2Q6UY27 113 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 GCSAMQ8N6F7 178 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 ZNF747Q9BV97 191 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 Q9H3A6 140 aa8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 SLC25A10Q9UBX3 287 aaPredicted RBP8.1□□□□□ -1.11
PDGFRB-207ENST00000520579 ACACAQ13085 2346 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 TMEM8BA6NDV4 472 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 MGST3O14880 152 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 PSMB2P49721 201 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 C17orf77Q96MU5 243 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 C11orf53Q8IXP5 236 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 CXXC4Q9H2H0 198 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 MALRD1Q5VYJ5 2156 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 IGKV1D-17A0A075B6S4 117 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 CENPVL3A0A0U1RRI6 287 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 MEOX1P50221 254 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 CD69Q07108 199 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 KLF5Q13887 457 aaPredicted RBP8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 TMEM105Q8N8V8 129 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 OR4X2Q8NGF9 303 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 MRPL20Q9BYC9 149 aaKnown RBP8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 TMEM126AQ9H061 195 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 CSMD1Q96PZ7 3565 aa8.09□□□□□ -1.11
PDGFRB-207ENST00000520579 C15orf65H3BRN8 121 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 SMAD7O15105 426 aaKnown RBP8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 DNPH1O43598 174 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 CCL3L1P16619 93 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 EIF4EBP1Q13541 118 aaPredicted RBP8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 C9orf153Q5TBE3 101 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 TPSG1Q9NRR2 321 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 DOPEY2Q9Y3R5 2298 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 OR4C13Q8NGP0 309 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 DNAJC30Q96LL9 226 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 A0A1B0GUT8 65 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 RNASE2P10153 161 aaKnown RBP8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 HRCT1Q6UXD1 115 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 PPP1R27Q86WC6 154 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 CHCHD1Q96BP2 118 aaKnown RBP8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 TIMD4Q96H15 378 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 CUL9Q8IWT3 2517 aa8.08□□□□□ -1.12
PDGFRB-207ENST00000520579 IGHV1-2P23083 117 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 CKS2P33552 79 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 PRNDQ9UKY0 176 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 IGKV2D-26A0A0A0MRZ7 120 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 J3KT08 172 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 M0R1B8 84 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 FXYD5Q96DB9 178 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 FOXC2Q99958 501 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 MSRB2Q9Y3D2 182 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 MGAQ8IWI9 3026 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 GATA4P43694 442 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 TMEM75Q8N9X5 138 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 CFHR4Q92496 578 aa8.07□□□□□ -1.12
PDGFRB-207ENST00000520579 TRAV4A0A0B4J268 109 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 UPK2O00526 184 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 GATA1P15976 413 aaPredicted RBP8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 TWIST1Q15672 202 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 POU2AF1Q16633 256 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 ZNF502Q8TBZ5 544 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 FBXL15Q9H469 300 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 KLF12Q9Y4X4 402 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 LYRM7Q5U5X0 104 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 IFI27L1Q96BM0 104 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 RNF125Q96EQ8 232 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 SPRY4Q9C004 299 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 SIGLEC8Q9NYZ4 499 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 ADGRG4Q8IZF6 3080 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 CGB1A6NKQ9 187 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 TMEM262E9PQX1 116 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 NPFFO15130 113 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 SPRY2O43597 315 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 NDUFA3O95167 84 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 IGLV3-19P01714 112 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 LINC01545Q5VT33 79 aa8.06□□□□□ -1.12
PDGFRB-207ENST00000520579 CCL8P80075 99 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 PRCDQ00LT1 54 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 RIGQ13278 110 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 PLGLAQ15195 96 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 OR9G4Q8NGQ1 327 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 Q8TAT8 98 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 AJUBAQ96IF1 538 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 C8orf49Q96NF6 230 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 HIST1H4GQ99525 98 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 CHCHD5Q9BSY4 110 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 TMEM14BQ9NUH8 114 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 PTPRBP23467 1997 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 A0A1B0GXF2 115 aa8.05□□□□□ -1.12
PDGFRB-207ENST00000520579 H7C2G1 150 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms