RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 TMEM252Q8N6L7 170 aa11.41□□□□□ -0.58
IGHV3-42-201ENST00000520410 S100ZQ8WXG8 99 aa11.41□□□□□ -0.58
IGHV3-42-201ENST00000520410 TIMM9Q9Y5J7 89 aa11.41□□□□□ -0.58
IGHV3-42-201ENST00000520410 H3BQ15 152 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 LEPP41159 167 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 CLINT1Q14677 625 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 KIR3DS1Q14943 382 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 GUK1Q16774 197 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 LGALS9BQ3B8N2 356 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 RNF212Q495C1 297 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 TMEM263Q8WUH6 116 aaKnown RBP11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 BLNKQ8WV28 456 aa11.4□□□□□ -0.58
IGHV3-42-201ENST00000520410 TRAV12-3A0A0B4J271 114 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 SNURFLB1AK76 121 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 SIX6O95475 246 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 RLN2P04090 185 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 IGLC2P0DOY2 106 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 OR5I1Q13606 314 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 GFI1BQ5VTD9 330 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 THAP6Q8TBB0 222 aa11.39□□□□□ -0.59
IGHV3-42-201ENST00000520410 CBY3A6NI87 242 aa11.38□□□□□ -0.59
IGHV3-42-201ENST00000520410 RPL29P47914 159 aaKnown RBP11.38□□□□□ -0.59
IGHV3-42-201ENST00000520410 ATP6V1FQ16864 119 aa11.38□□□□□ -0.59
IGHV3-42-201ENST00000520410 ZNF493Q6ZR52 646 aa11.38□□□□□ -0.59
IGHV3-42-201ENST00000520410 C20orf144Q9BQM9 153 aa11.38□□□□□ -0.59
IGHV3-42-201ENST00000520410 ZNF586Q9NXT0 402 aa11.38□□□□□ -0.59
IGHV3-42-201ENST00000520410 GAGE12BA1L429 117 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 PLAC8L1A1L4L8 177 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 RTL8CO15255 209 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 GAGE7O76087 117 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 GAGE12FP0CL80 117 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 GAGE12GP0CL81 117 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 GAGE12IP0CL82 117 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 PYYP10082 97 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 ASAH1Q13510 395 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 VWC2Q2TAL6 325 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 SLC25A31Q9H0C2 315 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 C11orf1Q9H5F2 150 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
IGHV3-42-201ENST00000520410 CCL18P55774 89 aa11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 ERCC8Q13216 396 aa11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 C1orf134Q5TEV5 83 aa11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 OR5C1Q8NGR4 320 aa11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 RNASE8Q8TDE3 154 aaKnown RBP11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 SAT2Q96F10 170 aaPredicted RBP11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 NPCDR1Q9BY65 106 aa11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 VPS13DQ5THJ4 4388 aa11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 FRAS1Q86XX4 4008 aa11.36□□□□□ -0.59
IGHV3-42-201ENST00000520410 A0A0J9YY99 117 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 NPIPB6E9PJ23 425 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 M0R3E3 92 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 MPDU1O75352 247 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 CT45A10P0DMU9 189 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 NHLH2Q02577 135 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 GCSAMLQ5JQS6 135 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 FAM122CQ6P4D5 195 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 RNF141Q8WVD5 230 aa11.35□□□□□ -0.59
IGHV3-42-201ENST00000520410 TRBV19A0A075B6N1 114 aa11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 E5RGE8 158 aa11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 UPK1BO75841 260 aa11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 HIST1H1EP10412 219 aaKnown RBP11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 OR5AC2Q9NZP5 309 aa11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 DNAH10Q8IVF4 4471 aa11.34□□□□□ -0.59
IGHV3-42-201ENST00000520410 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 INMT-MINDY4F8WBC2 141 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 SSNA1O43805 119 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 ZNF253O75346 499 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 FAM3BP58499 235 aaPredicted RBP11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 ICAM4Q14773 271 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 MIR17HGQ75NE6 70 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 KCNIP2Q9NS61 270 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 TMEM14CQ9P0S9 112 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 PRELID1Q9Y255 219 aa11.33□□□□□ -0.6
IGHV3-42-201ENST00000520410 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 TRAV26-1A0A087WT03 109 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 IGKV2-40A0A087WW87 121 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 C7orf71A4D174 169 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 PRAF2O60831 178 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 IGKV2D-40P01614 121 aaPredicted RBP11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 SLC25A5P05141 298 aaKnown RBP11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 RNASE4P34096 147 aaKnown RBP11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 IL15RAQ13261 267 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 BTN1A1Q13410 526 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 TMEM78Q5T7P6 136 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 Q6ZR54 194 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 LINC00299Q6ZSB3 139 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 MRPL53Q96EL3 112 aaKnown RBP11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 ODF3Q96PU9 254 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 PYGO2Q9BRQ0 406 aa11.32□□□□□ -0.6
IGHV3-42-201ENST00000520410 A0A1B0GVY2 172 aa11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 OR7C2O60412 319 aa11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 GPX1P07203 203 aa11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 OR10J4P0C629 311 aa11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 CYCSP99999 105 aaKnown RBP11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 SSX7Q7RTT5 188 aa11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 SLC25A2Q9BXI2 301 aa11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 NMES1Q9C002 83 aa11.31□□□□□ -0.6
IGHV3-42-201ENST00000520410 OR51M1Q9H341 326 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms