RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 RNF122Q9H9V4 155 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 C14orf105Q9NVL8 296 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 DKKL1Q9UK85 242 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 ANAPC10Q9UM13 185 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 BOKQ9UMX3 212 aaPredicted RBP0.69□□□□□ -2.3
SKP1-205ENST00000519054 POLR1DQ9Y2S0 133 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 C15orf41Q9Y2V0 281 aa0.69□□□□□ -2.3
SKP1-205ENST00000519054 IGHV3-64A0A075B6Q5 118 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 TMEM114B3SHH9 223 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 LST1O00453 97 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 ZNF737O75373 536 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 LYPLA2O95372 231 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 NSA2O95478 260 aaKnown RBP0.68□□□□□ -2.3
SKP1-205ENST00000519054 UCHL1P09936 223 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 DEFA4P12838 97 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 RPL12P30050 165 aaKnown RBP0.68□□□□□ -2.3
SKP1-205ENST00000519054 MAGEA2P43356 314 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 CDC34P49427 236 aaPredicted RBP0.68□□□□□ -2.3
SKP1-205ENST00000519054 BLVRAP53004 296 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 SLC38A11Q08AI6 406 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 ALX1Q15699 326 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 ACSM3Q53FZ2 586 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 HSP90B2PQ58FF3 399 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 SFXN4Q6P4A7 337 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 LRRN1Q6UXK5 716 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 RASSF6Q6ZTQ3 369 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 SLC35E3Q7Z769 313 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 DEFB125Q8N687 156 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 C9orf163Q8N9P6 203 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 GPR32P1Q8NGA4 272 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 OR5B17Q8NGF7 314 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 SELENOSQ9BQE4 189 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 DOHHQ9BU89 302 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 CYSTM1Q9H1C7 97 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 WFDC10AQ9H1F0 79 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 TAAR3PQ9P1P4 343 aa0.68□□□□□ -2.3
SKP1-205ENST00000519054 A0A0A6YYH2 397 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 A0A0J9YY10 115 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 A6NJ64 397 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 PFDN6O15212 129 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 PLA2G10O15496 165 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 LGALS1P09382 135 aaKnown RBP0.67□□□□□ -2.3
SKP1-205ENST00000519054 TFPTP0C1Z6 253 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 PIRTP0C851 137 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 RPL28P46779 137 aaKnown RBP0.67□□□□□ -2.3
SKP1-205ENST00000519054 INSL3P51460 131 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 CCL8P80075 99 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 GNA12Q03113 381 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 CDKL4Q5MAI5 379 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 FAM78BQ5VT40 261 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 LPCAT4Q643R3 524 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 SCIMPQ6UWF3 145 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 LYZL1Q6UWQ5 148 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 TAC4Q86UU9 113 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 COMMD7Q86VX2 200 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 DYNAPQ8N1N2 210 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 OR8B12Q8NGG6 310 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 OR13C8Q8NGS7 320 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 JOSD2Q8TAC2 188 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 RNF133Q8WVZ7 376 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 C12orf43Q96C57 262 aaKnown RBP0.67□□□□□ -2.3
SKP1-205ENST00000519054 IMMP2LQ96T52 175 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 PRELID1Q9Y255 219 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 ANGPT4Q9Y264 503 aa0.67□□□□□ -2.3
SKP1-205ENST00000519054 TRAV7A0A075B6U4 112 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 IGKV2-40A0A087WW87 121 aaPredicted RBP0.66□□□□□ -2.3
SKP1-205ENST00000519054 IGHV1-18A0A0C4DH31 117 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 A0A0J9YW62 118 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 A0A1B0GW54 56 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 OR4C45A6NMZ5 311 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 CLDN25C9JDP6 229 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 H0Y980 276 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 H3BT86 120 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 TXNDC9O14530 226 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 SSNA1O43805 119 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 NIPSNAP2O75323 286 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 IGKV2D-40P01614 121 aaPredicted RBP0.66□□□□□ -2.3
SKP1-205ENST00000519054 APOEP02649 317 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 MT1FP04733 61 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 MAP2K4P45985 399 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 FXYD7P58549 80 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 TAS2R20P59543 309 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 BTG2P78543 158 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 GLO1Q04760 184 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 RSU1Q15404 277 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 DEFB135Q30KP9 77 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 C1orf195Q5TG92 126 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 SYPL2Q5VXT5 272 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 SLC22A24Q8N4F4 322 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 OTUD6BQ8N6M0 293 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 PLPP5Q8NEB5 264 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 NAT14Q8WUY8 206 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 OR8D2Q9GZM6 311 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 CXorf21Q9HAI6 301 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 PXMP4Q9Y6I8 212 aa0.66□□□□□ -2.3
SKP1-205ENST00000519054 A0A087WTM6 91 aa0.65□□□□□ -2.31
SKP1-205ENST00000519054 IGKV3D-7A0A0C4DH55 119 aa0.65□□□□□ -2.31
SKP1-205ENST00000519054 IGKV3OR2-268A0A0C4DH90 116 aa0.65□□□□□ -2.31
SKP1-205ENST00000519054 IGHV1-69-2A0A0G2JMI3 117 aa0.65□□□□□ -2.31
SKP1-205ENST00000519054 TMEM269A0A1B0GVZ9 245 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms