RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 S1PR2O95136 353 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 CPSF4O95639 269 aaKnown RBP2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 ALDH3A1P30838 453 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 AESQ08117 197 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 SPA17Q15506 151 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 C10orf67Q8IYJ2 551 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 CLECL1Q8IZS7 167 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 Q8N6K4 173 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 YIPF7Q8N8F6 280 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR8J2Q8NGG1 315 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 TNFAIP8L1Q8WVP5 186 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 RBPMSQ93062 196 aaKnown RBP2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 LEAP2Q969E1 77 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 TLCD1Q96CP7 247 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 REEP6Q96HR9 211 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 LINC00574Q9H8X3 128 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 MARCOQ9UEW3 520 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 LINC00588Q9Y4M8 146 aa2.74□□□□□ -1.97
HMGB1P23-201ENST00000518743 M0R135 149 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 DENRO43583 198 aaKnown RBP2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 RBP1P09455 135 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 SPART-AS1P0CW21 52 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 CBLN1P23435 193 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 DDTP30046 118 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 MAP2K4P45985 399 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR1E2P47887 323 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 CLDN12P56749 244 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 GABARAPL2P60520 117 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 MRPS15P82914 257 aaKnown RBP2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 SMAGPQ0VAQ4 97 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 PLGLAQ15195 96 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 GRK1Q15835 563 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 LTC4SQ16873 150 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 C4orf26Q17RF5 130 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 HEPN1Q6WQI6 88 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 ANGPTL5Q86XS5 388 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 ZNF565Q8N9K5 539 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 BPIFB6Q8NFQ5 453 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR9I1Q8NGQ6 314 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 HAVCR2Q8TDQ0 301 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 SPTSSAQ969W0 71 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 RMI2Q96E14 147 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 OR52E6Q96RD3 313 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 PAIP2Q9BPZ3 127 aaKnown RBP2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 MROQ9BYG7 248 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 CHST6Q9GZX3 395 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 MS4A6AQ9H2W1 248 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 RASL12Q9NYN1 266 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 FIS1Q9Y3D6 152 aa2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 FCGBPQ9Y6R7 5405 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P23-201ENST00000518743 USH2AO75445 5202 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 B4DEV8 164 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 CXCR6O00574 342 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 HAND1O96004 215 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 HLA-DRB1P01911 266 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 C1QBP02746 253 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 TYMSP04818 313 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 AKR1C2P52895 323 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 PRDX4Q13162 271 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 ELP2Q6IA86 826 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 HAGHLQ6PII5 290 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 Q6ZQT7 251 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 Q6ZRN7 208 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 LYZL2Q7Z4W2 148 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 PTH2Q96A98 100 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 TESCQ96BS2 214 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 SEC22CQ9BRL7 303 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 SHANK2-AS3Q9BTD1 123 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 FAM103A1Q9BTL3 118 aaKnown RBP2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 VSIRQ9H7M9 311 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 HRASLSQ9HDD0 168 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 CALML5Q9NZT1 146 aa2.72□□□□□ -1.97
HMGB1P23-201ENST00000518743 TRAV3A0A0B4J244 114 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 LRCOL1A6NCL2 159 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR4C46A6NHA9 309 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 OR5H14A6NHG9 310 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 A8MT66 165 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZNF736B4DX44 427 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 LTAP01374 205 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 ASAH2BP0C7U1 165 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 SULT1A2P50226 295 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 NKX2-5P52952 324 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 LSM6P62312 80 aaKnown RBP2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 CASP8Q14790 479 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 BATFQ16520 125 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 DNLZQ5SXM8 178 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 CD200R1LQ6Q8B3 271 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 TBPL2Q6SJ96 375 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 FAM131AQ6UXB0 335 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 SLC51BQ86UW2 128 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 ZFP82Q8N141 532 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 KRTCAP2Q8N6L1 136 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 DEDD2Q8WXF8 326 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 GTSF1LQ9H1H1 148 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 MAP1LC3AQ9H492 121 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 HES4Q9HCC6 221 aa2.71□□□□□ -1.98
HMGB1P23-201ENST00000518743 COLCA2A8K830 154 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 ISLRO14498 428 aa2.7□□□□□ -1.98
HMGB1P23-201ENST00000518743 PSCAO43653 123 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms