RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 IGHV3-66A0A0C4DH42 116 aa11.89□□□□□ -0.51
THUMPD3-210ENST00000515662 ZNF207O43670 478 aaKnown RBP11.89□□□□□ -0.51
THUMPD3-210ENST00000515662 IGHV3-11P01762 117 aa11.89□□□□□ -0.51
THUMPD3-210ENST00000515662 TCL1AP56279 114 aa11.89□□□□□ -0.51
THUMPD3-210ENST00000515662 LINC00322Q6ZN03 302 aaPredicted RBP11.89□□□□□ -0.51
THUMPD3-210ENST00000515662 GRAMD2BQ96HH9 432 aa11.89□□□□□ -0.51
THUMPD3-210ENST00000515662 ZNF492Q9P255 531 aa11.89□□□□□ -0.51
THUMPD3-210ENST00000515662 A0A0G2JLM5 398 aa11.88□□□□□ -0.51
THUMPD3-210ENST00000515662 SPINK4O60575 86 aa11.88□□□□□ -0.51
THUMPD3-210ENST00000515662 PRB4P10163 310 aaPredicted RBP11.88□□□□□ -0.51
THUMPD3-210ENST00000515662 PSG3Q16557 428 aa11.88□□□□□ -0.51
THUMPD3-210ENST00000515662 F2Z2F3 143 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 HOXA3O43365 443 aaPredicted RBP11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 CSN1S1P47710 185 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 OR4X2Q8NGF9 303 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 ZNF331Q9NQX6 463 aaPredicted RBP11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 TP53TG3Q9ULZ0 132 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 PSG8Q9UQ74 426 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 HELZ2Q9BYK8 2649 aaKnown RBP11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 CREBBPQ92793 2442 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 TEX15Q9BXT5 2789 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 IGHV3OR16-13A0A075B7E8 117 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 IGHV3-49A0A0A0MS15 119 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 IGHV3-74A0A0B4J1X5 117 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 IGHG4P01861 327 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 Q71RC1 249 aaPredicted RBP11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 ARL6IP6Q8N6S5 226 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 ZFP30Q9Y2G7 519 aa11.87□□□□□ -0.51
THUMPD3-210ENST00000515662 NDUFA4O00483 81 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 PRSS22Q9GZN4 317 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 SERTM2A0A1B0GWG4 89 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 EREGO14944 169 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 PSMB8P28062 276 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 LINC00310P59036 64 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 IGFL4Q6B9Z1 124 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 UNQ9165/PRO28630Q6UXU0 137 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 PDZD2O15018 2839 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 MXRA5Q9NR99 2828 aa11.86□□□□□ -0.51
THUMPD3-210ENST00000515662 SMAD7O15105 426 aaKnown RBP11.85□□□□□ -0.51
THUMPD3-210ENST00000515662 SLC35B1P78383 322 aa11.85□□□□□ -0.51
THUMPD3-210ENST00000515662 RPP21Q9H633 154 aaKnown RBP11.85□□□□□ -0.51
THUMPD3-210ENST00000515662 ITPR3Q14573 2671 aa11.85□□□□□ -0.51
THUMPD3-210ENST00000515662 IZUMO1RA6ND01 250 aa11.85□□□□□ -0.51
THUMPD3-210ENST00000515662 TSKUQ8WUA8 353 aa11.85□□□□□ -0.51
THUMPD3-210ENST00000515662 TMEM89A2RUT3 159 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 CHEK1O14757 476 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 P01737 135 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 HLA-DMBP28068 263 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 RPL19P84098 196 aaKnown RBP11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 DAZAP1Q96EP5 407 aaKnown RBP11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 ZC2HC1AQ96GY0 325 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 ASCL2Q99929 193 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 ZNF702PQ9H963 129 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 IGKV2-40A0A087WW87 121 aaPredicted RBP11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 IGKV2D-40P01614 121 aaPredicted RBP11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 CT83Q5H943 113 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 C16orf54Q6UWD8 224 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 C10orf99Q6UWK7 81 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 NDUFAF3Q9BU61 184 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 NPFFR1Q9GZQ6 430 aa11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 MRPL18Q9H0U6 180 aaKnown RBP11.84□□□□□ -0.51
THUMPD3-210ENST00000515662 IQCJQ1A5X6 159 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 TDRG1Q3Y452 100 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 IL17RELQ6ZVW7 336 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 GNB1LQ9BYB4 327 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 NAT8BQ9UHF3 227 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 ZNF705FA8MVS1 300 aaPredicted RBP11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 NPIPB6E9PJ23 425 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 RAB4BP61018 213 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 LCN12Q6JVE5 192 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 Q6ZWC4 215 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 SIGLECL1Q8N7X8 197 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 NUP35Q8NFH5 326 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 GLMPQ8WWB7 406 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 NEU1Q99519 415 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 SLC50A1Q9BRV3 221 aa11.83□□□□□ -0.52
THUMPD3-210ENST00000515662 SERF1AO75920 110 aa11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 MRPL54Q6P161 138 aaKnown RBP11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 FOXC2Q99958 501 aa11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 PEF1Q9UBV8 284 aaKnown RBP11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 NAGKQ9UJ70 344 aa11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 ZNF469Q96JG9 3925 aaPredicted RBP11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 WDR73Q6P4I2 378 aa11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 TEX29Q8N6K0 151 aa11.82□□□□□ -0.52
THUMPD3-210ENST00000515662 TRAV8-2A0A0B4J237 113 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 FBLL1A6NHQ2 334 aaKnown RBP11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 HIGD1CA8MV81 97 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 A8MWL6 223 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 ZNF705DP0CH99 300 aaPredicted RBP11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 ZNF705BP0CI00 300 aaPredicted RBP11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 KIAA1644Q3SXP7 199 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 COX19Q49B96 90 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 TMEM136Q6ZRR5 245 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 C8orf86Q6ZUL3 223 aa11.81□□□□□ -0.52
THUMPD3-210ENST00000515662 RNF182Q8N6D2 247 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms