RNA–Protein interactions for RNA: ENST00000515588.1

SERF1B-208, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 2 BASIC

Gene SERF1B, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-208ENST00000515588 C17orf112F2Z3M2 114 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 M0R3E3 92 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 INSP01308 110 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 IFNA5P01569 189 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 HBE1P02100 147 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 KIR3DS1Q14943 382 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 C2CD4CQ8TF44 421 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 PARD6GQ9BYG4 376 aaPredicted RBP11.26□□□□□ -0.61
SERF1B-208ENST00000515588 KCNIP2Q9NS61 270 aa11.26□□□□□ -0.61
SERF1B-208ENST00000515588 TMEM189A5PLL7 270 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 ZNF705GA8MUZ8 300 aaPredicted RBP11.25□□□□□ -0.61
SERF1B-208ENST00000515588 LY6G6CO95867 125 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 RRN3P1Q2M238 152 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 RGS21Q2M5E4 152 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 FFAR4Q5NUL3 377 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 RPP25LQ8N5L8 163 aaKnown RBP11.25□□□□□ -0.61
SERF1B-208ENST00000515588 SCGB1C1Q8TD33 95 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 BLNKQ8WV28 456 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 MRPL32Q9BYC8 188 aaKnown RBP11.25□□□□□ -0.61
SERF1B-208ENST00000515588 PPP1R14DQ9NXH3 145 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 PLA2G2EQ9NZK7 142 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
SERF1B-208ENST00000515588 KMT2AQ03164 3969 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 SPART-AS1P0CW21 52 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 CDKN1BP46527 198 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 PDE6HQ13956 83 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 OXA1LQ15070 435 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 FAM222AQ5U5X8 452 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 EXOC3-AS1Q8N2X6 119 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 FXYD5Q96DB9 178 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 ZNF503Q96F45 646 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 OR51M1Q9H341 326 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 YTHDF2Q9Y5A9 579 aaKnown RBP11.24□□□□□ -0.61
SERF1B-208ENST00000515588 TIMM9Q9Y5J7 89 aa11.24□□□□□ -0.61
SERF1B-208ENST00000515588 IGLL5B9A064 214 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 NPIPB6E9PJ23 425 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 EIF3GO75821 320 aaKnown RBP eCLIP11.23□□□□□ -0.61
SERF1B-208ENST00000515588 GIPP09681 153 aaPredicted RBP11.23□□□□□ -0.61
SERF1B-208ENST00000515588 OR10J4P0C629 311 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 NBEAP1P0C6P0 100 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 AZU1P20160 251 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
SERF1B-208ENST00000515588 AQP10Q96PS8 301 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 PAXXQ9BUH6 204 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 APLNQ9ULZ1 77 aa11.23□□□□□ -0.61
SERF1B-208ENST00000515588 DEFB131BA0A096LNP1 70 aa11.22□□□□□ -0.61
SERF1B-208ENST00000515588 ERCC8Q13216 396 aa11.22□□□□□ -0.61
SERF1B-208ENST00000515588 LINC01587Q99440 93 aa11.22□□□□□ -0.61
SERF1B-208ENST00000515588 PLAC8L1A1L4L8 177 aa11.21□□□□□ -0.61
SERF1B-208ENST00000515588 ICAM4Q14773 271 aa11.21□□□□□ -0.61
SERF1B-208ENST00000515588 GFI1BQ5VTD9 330 aa11.21□□□□□ -0.61
SERF1B-208ENST00000515588 RNF141Q8WVD5 230 aa11.21□□□□□ -0.61
SERF1B-208ENST00000515588 ASB13Q8WXK3 278 aa11.21□□□□□ -0.61
SERF1B-208ENST00000515588 PHYHIPLQ96FC7 376 aa11.21□□□□□ -0.61
SERF1B-208ENST00000515588 PRELID1Q9Y255 219 aa11.21□□□□□ -0.61
SERF1B-208ENST00000515588 IGHV4-4A0A075B6R2 117 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 G3V3Q6 166 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 OR7C2O60412 319 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 TSPOP30536 169 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 TCTAP57738 103 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 TAS2R60P59551 318 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 LGALS9CQ6DKI2 356 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 TMEM256Q8N2U0 113 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 ODF3Q96PU9 254 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 NIPSNAP3BQ9BS92 247 aa11.2□□□□□ -0.62
SERF1B-208ENST00000515588 TEX48A0A1B0GUV7 120 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 RNF222A6NCQ9 220 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 J3KRW8 73 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 RAB2AP61019 212 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 FAM122CQ6P4D5 195 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 FAM19A4Q96LR4 140 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 AGPAT4-IT1Q9H0P7 198 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 AAMDCQ9H7C9 122 aa11.19□□□□□ -0.62
SERF1B-208ENST00000515588 IGKV2-40A0A087WW87 121 aaPredicted RBP11.18□□□□□ -0.62
SERF1B-208ENST00000515588 IGKV2D-40P01614 121 aaPredicted RBP11.18□□□□□ -0.62
SERF1B-208ENST00000515588 HTN1P15515 57 aa11.18□□□□□ -0.62
SERF1B-208ENST00000515588 M6PRP20645 277 aa11.18□□□□□ -0.62
SERF1B-208ENST00000515588 UBE2L3P68036 154 aaKnown RBP11.18□□□□□ -0.62
SERF1B-208ENST00000515588 ACOT6Q3I5F7 207 aaPredicted RBP11.18□□□□□ -0.62
SERF1B-208ENST00000515588 C9orf47Q6ZRZ4 202 aa11.18□□□□□ -0.62
SERF1B-208ENST00000515588 HSD17B11Q8NBQ5 300 aa11.18□□□□□ -0.62
SERF1B-208ENST00000515588 OR2T35Q8NGX2 323 aa11.18□□□□□ -0.62
SERF1B-208ENST00000515588 VGLL1Q99990 258 aa11.18□□□□□ -0.62
SERF1B-208ENST00000515588 C20orf144Q9BQM9 153 aa11.18□□□□□ -0.62
SERF1B-208ENST00000515588 FXYD6-FXYD2A0A087WZ82 144 aa11.17□□□□□ -0.62
SERF1B-208ENST00000515588 H7BYZ3 331 aa11.17□□□□□ -0.62
SERF1B-208ENST00000515588 LEPP41159 167 aa11.17□□□□□ -0.62
SERF1B-208ENST00000515588 RANP62826 216 aaKnown RBP11.17□□□□□ -0.62
SERF1B-208ENST00000515588 ZNF266Q14584 549 aa11.17□□□□□ -0.62
SERF1B-208ENST00000515588 KHDC3LQ587J8 217 aa11.17□□□□□ -0.62
SERF1B-208ENST00000515588 RNASE8Q8TDE3 154 aaKnown RBP11.17□□□□□ -0.62
SERF1B-208ENST00000515588 LINC00477Q96M19 166 aa11.17□□□□□ -0.62
SERF1B-208ENST00000515588 TNFSF18Q9UNG2 199 aa11.17□□□□□ -0.62
SERF1B-208ENST00000515588 TRAV12-3A0A0B4J271 114 aa11.16□□□□□ -0.62
SERF1B-208ENST00000515588 LYRM9A8MSI8 78 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms