RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 H7BYZ3 331 aa9.68□□□□□ -0.86
TCOF1-215ENST00000515516 SLC17A3O00476 420 aa9.68□□□□□ -0.86
TCOF1-215ENST00000515516 MPDU1O75352 247 aa9.68□□□□□ -0.86
TCOF1-215ENST00000515516 IL15RAQ13261 267 aa9.68□□□□□ -0.86
TCOF1-215ENST00000515516 RNF212Q495C1 297 aa9.68□□□□□ -0.86
TCOF1-215ENST00000515516 ZNF493Q6ZR52 646 aa9.68□□□□□ -0.86
TCOF1-215ENST00000515516 CHAC2Q8WUX2 184 aa9.68□□□□□ -0.86
TCOF1-215ENST00000515516 TIMM8BQ9Y5J9 83 aaPredicted RBP9.68□□□□□ -0.86
TCOF1-215ENST00000515516 PRAC2D3DTV9 90 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 UPK1BO75841 260 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 ATP5G1P05496 136 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 LEPP41159 167 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 ATP5G3P48201 142 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 CYCSP99999 105 aaKnown RBP9.67□□□□□ -0.86
TCOF1-215ENST00000515516 FCN2Q15485 313 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 LGALS9BQ3B8N2 356 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 SAT2Q96F10 170 aaPredicted RBP9.67□□□□□ -0.86
TCOF1-215ENST00000515516 ATG101Q9BSB4 218 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 TIMM9Q9Y5J7 89 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 DNAH10Q8IVF4 4471 aa9.67□□□□□ -0.86
TCOF1-215ENST00000515516 CBY3A6NI87 242 aa9.66□□□□□ -0.86
TCOF1-215ENST00000515516 E5RGE8 158 aa9.66□□□□□ -0.86
TCOF1-215ENST00000515516 PRAF2O60831 178 aa9.66□□□□□ -0.86
TCOF1-215ENST00000515516 ZNF253O75346 499 aa9.66□□□□□ -0.86
TCOF1-215ENST00000515516 TMEM263Q8WUH6 116 aaKnown RBP9.66□□□□□ -0.86
TCOF1-215ENST00000515516 NMES1Q9C002 83 aa9.66□□□□□ -0.86
TCOF1-215ENST00000515516 ZNF586Q9NXT0 402 aa9.66□□□□□ -0.86
TCOF1-215ENST00000515516 DNAH6Q9C0G6 4158 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 IGLV2-18A0A075B6J9 118 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 INMT-MINDY4F8WBC2 141 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 J3KRW8 73 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 SIX6O95475 246 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 HIST1H1EP10412 219 aaKnown RBP9.65□□□□□ -0.86
TCOF1-215ENST00000515516 NHLH2Q02577 135 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 LRRC37A5PQ49AS3 106 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 OR5C1Q8NGR4 320 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 MRPL53Q96EL3 112 aaKnown RBP9.65□□□□□ -0.86
TCOF1-215ENST00000515516 ODF3Q96PU9 254 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 NPCDR1Q9BY65 106 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 NOP10Q9NPE3 64 aaKnown RBP9.65□□□□□ -0.86
TCOF1-215ENST00000515516 KCNIP2Q9NS61 270 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 TMEM14CQ9P0S9 112 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 PRELID1Q9Y255 219 aa9.65□□□□□ -0.86
TCOF1-215ENST00000515516 FRAS1Q86XX4 4008 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 TRBV19A0A075B6N1 114 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 PLAC8L1A1L4L8 177 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 NUDT3O95989 172 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 CT45A10P0DMU9 189 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 FAM3BP58499 235 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-215ENST00000515516 SOHLH1Q5JUK2 328 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 GFI1BQ5VTD9 330 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 THAP6Q8TBB0 222 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 BLNKQ8WV28 456 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 PARD6GQ9BYG4 376 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-215ENST00000515516 AAMDCQ9H7C9 122 aa9.64□□□□□ -0.87
TCOF1-215ENST00000515516 TRAV12-3A0A0B4J271 114 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 PRSS29PA6NIE9 313 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 SNURFLB1AK76 121 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 NPIPB6E9PJ23 425 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 C17orf112F2Z3M2 114 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 DEFA1P59665 94 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 DEFA3P59666 94 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 PDE6HQ13956 83 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 CLINT1Q14677 625 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 KIR3DS1Q14943 382 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 RNASE8Q8TDE3 154 aaKnown RBP9.63□□□□□ -0.87
TCOF1-215ENST00000515516 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 PTTG2Q9NZH5 202 aa9.63□□□□□ -0.87
TCOF1-215ENST00000515516 A6NHS1 94 aa9.62□□□□□ -0.87
TCOF1-215ENST00000515516 SSNA1O43805 119 aa9.62□□□□□ -0.87
TCOF1-215ENST00000515516 SLC25A5P05141 298 aaKnown RBP9.62□□□□□ -0.87
TCOF1-215ENST00000515516 PYYP10082 97 aa9.62□□□□□ -0.87
TCOF1-215ENST00000515516 CCL18P55774 89 aa9.62□□□□□ -0.87
TCOF1-215ENST00000515516 PYGO2Q9BRQ0 406 aa9.62□□□□□ -0.87
TCOF1-215ENST00000515516 OR5AC2Q9NZP5 309 aa9.62□□□□□ -0.87
TCOF1-215ENST00000515516 M0R3E3 92 aa9.61□□□□□ -0.87
TCOF1-215ENST00000515516 PET100P0DJ07 73 aa9.61□□□□□ -0.87
TCOF1-215ENST00000515516 ERCC8Q13216 396 aa9.61□□□□□ -0.87
TCOF1-215ENST00000515516 OR5I1Q13606 314 aa9.61□□□□□ -0.87
TCOF1-215ENST00000515516 GCSAMLQ5JQS6 135 aa9.61□□□□□ -0.87
TCOF1-215ENST00000515516 OR51M1Q9H341 326 aa9.61□□□□□ -0.87
TCOF1-215ENST00000515516 GAGE12BA1L429 117 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 RTL8CO15255 209 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 GAGE7O76087 117 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 NDUFB4O95168 129 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 NBEAP1P0C6P0 100 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 GAGE12FP0CL80 117 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 GAGE12GP0CL81 117 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 GAGE12IP0CL82 117 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 IFITM3Q01628 133 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 ICAM4Q14773 271 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 TMEM78Q5T7P6 136 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 C1orf134Q5TEV5 83 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 MIR17HGQ75NE6 70 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 EXOC3-AS1Q8N2X6 119 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 PPP1R1CQ8WVI7 109 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 MARVELD1Q9BSK0 173 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 SLC25A2Q9BXI2 301 aa9.6□□□□□ -0.87
TCOF1-215ENST00000515516 MRPL32Q9BYC8 188 aaKnown RBP9.6□□□□□ -0.87
TCOF1-215ENST00000515516 WDR61Q9GZS3 305 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms