RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 RHOBP62745 196 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 RRN3P1Q2M238 152 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 C2CD4CQ8TF44 421 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 LINC00476Q8WZB0 136 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 FAM167A-AS1Q96KT0 104 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 AQP10Q96PS8 301 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 ODF3Q96PU9 254 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 C20orf144Q9BQM9 153 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 TMEM208Q9BTX3 173 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 SLC25A2Q9BXI2 301 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 PPP1R14DQ9NXH3 145 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 CELA1Q9UNI1 258 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 FUT9Q9Y231 359 aa9.18□□□□□ -0.94
CLCN3-210ENST00000515420 H3BTX0 84 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 NDUFB4O95168 129 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 SNRPCP09234 159 aaKnown RBP9.17□□□□□ -0.94
CLCN3-210ENST00000515420 SPART-AS1P0CW21 52 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 TSPOP30536 169 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 ZNF266Q14584 549 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 OXA1LQ15070 435 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 MIR17HGQ75NE6 70 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 BAP18Q8IXM2 172 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 SMIM3Q9BZL3 60 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
CLCN3-210ENST00000515420 LOC102723971A0A1B0GUV8 181 aa9.16□□□□□ -0.94
CLCN3-210ENST00000515420 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
CLCN3-210ENST00000515420 PYYP10082 97 aa9.16□□□□□ -0.94
CLCN3-210ENST00000515420 FFAR4Q5NUL3 377 aa9.16□□□□□ -0.94
CLCN3-210ENST00000515420 Q6ZTC4 211 aa9.16□□□□□ -0.94
CLCN3-210ENST00000515420 OR51M1Q9H341 326 aa9.16□□□□□ -0.94
CLCN3-210ENST00000515420 AAMDCQ9H7C9 122 aa9.16□□□□□ -0.94
CLCN3-210ENST00000515420 NBEAP1P0C6P0 100 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 TAS2R45P59539 299 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 C12orf74Q32Q52 190 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 KHDC3LQ587J8 217 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 LYPD1Q8N2G4 141 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 PAXXQ9BUH6 204 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 WFDC1Q9HC57 220 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 DKK2Q9UBU2 259 aa9.15□□□□□ -0.94
CLCN3-210ENST00000515420 PLECQ15149 4684 aaKnown RBP9.14□□□□□ -0.95
CLCN3-210ENST00000515420 ALMS1Q8TCU4 4167 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 TRAV12-2A0A075B6T6 113 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 PRAC2D3DTV9 90 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 OR7C2O60412 319 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 M6PRP20645 277 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 LEPP41159 167 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 TAS2R60P59551 318 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 ACOT6Q3I5F7 207 aaPredicted RBP9.14□□□□□ -0.95
CLCN3-210ENST00000515420 LGALS9CQ6DKI2 356 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 RPP25LQ8N5L8 163 aaKnown RBP9.14□□□□□ -0.95
CLCN3-210ENST00000515420 BLNKQ8WV28 456 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 RNF141Q8WVD5 230 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 FXYD5Q96DB9 178 aa9.14□□□□□ -0.95
CLCN3-210ENST00000515420 YTHDF2Q9Y5A9 579 aaKnown RBP9.14□□□□□ -0.95
CLCN3-210ENST00000515420 LYRM9A8MSI8 78 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 H7BYZ3 331 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 M0R3E3 92 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 EMP1P54849 157 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 PQLC2Q6ZP29 291 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 INO80EQ8NBZ0 244 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-210ENST00000515420 OR2G3Q8NGZ4 309 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 LINC00477Q96M19 166 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 NIPSNAP3BQ9BS92 247 aa9.13□□□□□ -0.95
CLCN3-210ENST00000515420 PSMG3Q9BT73 122 aaPredicted RBP9.13□□□□□ -0.95
CLCN3-210ENST00000515420 DNAH1Q9P2D7 4330 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 DEFB131BA0A096LNP1 70 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 IGLL5B9A064 214 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 LY6G6CO95867 125 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 NMBP08949 121 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 OR10J4P0C629 311 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 CT45A10P0DMU9 189 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 UBE2L3P68036 154 aaKnown RBP9.12□□□□□ -0.95
CLCN3-210ENST00000515420 ICAM4Q14773 271 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 Q5BKY6 102 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 C9orf47Q6ZRZ4 202 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 EXOC3-AS1Q8N2X6 119 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 OR2T35Q8NGX2 323 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 ZNF503Q96F45 646 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 C16orf74Q96GX8 76 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 FAM210BQ96KR6 192 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 LINC01587Q99440 93 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 APLNQ9ULZ1 77 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 TNFSF18Q9UNG2 199 aa9.12□□□□□ -0.95
CLCN3-210ENST00000515420 IGHV4-4A0A075B6R2 117 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 TRBV7-9A0A0J9YWB2 115 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 A0A1W2PPV4 95 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 RBAKDNA6NC62 111 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 RNF222A6NCQ9 220 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 ZNF705GA8MUZ8 300 aaPredicted RBP9.11□□□□□ -0.95
CLCN3-210ENST00000515420 SLC25A5P05141 298 aaKnown RBP9.11□□□□□ -0.95
CLCN3-210ENST00000515420 SERF2P84101 59 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 GFI1BQ5VTD9 330 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 TMEM263Q8WUH6 116 aaKnown RBP9.11□□□□□ -0.95
CLCN3-210ENST00000515420 PHYHIPLQ96FC7 376 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 FAM19A4Q96LR4 140 aa9.11□□□□□ -0.95
CLCN3-210ENST00000515420 FXYD6-FXYD2A0A087WZ82 144 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 PLAC8L1A1L4L8 177 aa9.1□□□□□ -0.95
CLCN3-210ENST00000515420 KLLNB2CW77 178 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms