RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 KRTAP21-3Q3LHN1 58 aa12.56□□□□□ -0.4
AP3S1-208ENST00000515066 MCRIP2Q9BUT9 160 aaKnown RBP12.56□□□□□ -0.4
AP3S1-208ENST00000515066 SMDT1Q9H4I9 107 aa12.56□□□□□ -0.4
AP3S1-208ENST00000515066 NOTCH1P46531 2555 aa12.56□□□□□ -0.4
AP3S1-208ENST00000515066 NDUFS6O75380 124 aaKnown RBP12.55□□□□□ -0.4
AP3S1-208ENST00000515066 PAFAH1B2P68402 229 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 PEA15Q15121 130 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 PSG3Q16557 428 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 SAMD13Q5VXD3 122 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 UQCC3Q6UW78 93 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 C11orf52Q96A22 123 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 EPDR1Q9UM22 224 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 NBEAL1Q6ZS30 2694 aa12.55□□□□□ -0.4
AP3S1-208ENST00000515066 PDE6DO43924 150 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 TCRAP04437 139 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 ZNF688P0C7X2 276 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 LCN12Q6JVE5 192 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 CYB561D1Q8N8Q1 229 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 C2CD4CQ8TF44 421 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 MRPL53Q96EL3 112 aaKnown RBP12.54□□□□□ -0.4
AP3S1-208ENST00000515066 TCEAL7Q9BRU2 100 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 DNHD1Q96M86 4753 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 PRAC2D3DTV9 90 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 TMEM250H0YL14 139 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 PEX7O00628 323 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 DEFB1P60022 68 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 GUCA2BQ16661 112 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 DERL1Q9BUN8 251 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 TREM1Q9NP99 234 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 CLEC5AQ9NY25 188 aa12.54□□□□□ -0.4
AP3S1-208ENST00000515066 OR4C46A6NHA9 309 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 DIRC3C9JPN6 131 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 ID1P41134 155 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 ARL6IP6Q8N6S5 226 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 CMTM2Q8TAZ6 248 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 HIST1H2BAQ96A08 127 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 CITED4Q96RK1 184 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 ATG101Q9BSB4 218 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 RPH3ALQ9UNE2 315 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 PRELID1Q9Y255 219 aa12.53□□□□□ -0.4
AP3S1-208ENST00000515066 F6UZH7 168 aa12.52□□□□□ -0.4
AP3S1-208ENST00000515066 SNRPD3P62318 126 aaKnown RBP12.52□□□□□ -0.4
AP3S1-208ENST00000515066 BEAN1Q3B7T3 259 aa12.52□□□□□ -0.4
AP3S1-208ENST00000515066 PSMG4Q5JS54 123 aa12.52□□□□□ -0.4
AP3S1-208ENST00000515066 PRR31Q5SQ13 230 aa12.52□□□□□ -0.4
AP3S1-208ENST00000515066 RPUSD4Q96CM3 377 aaKnown RBP12.52□□□□□ -0.4
AP3S1-208ENST00000515066 LINC00479Q96M42 142 aa12.52□□□□□ -0.4
AP3S1-208ENST00000515066 LINC00052Q96N35 136 aa12.52□□□□□ -0.4
AP3S1-208ENST00000515066 SLC35B3Q9H1N7 401 aa12.52□□□□□ -0.4
AP3S1-208ENST00000515066 IGKV2-40A0A087WW87 121 aaPredicted RBP12.51□□□□□ -0.41
AP3S1-208ENST00000515066 IGKV2D-40P01614 121 aaPredicted RBP12.51□□□□□ -0.41
AP3S1-208ENST00000515066 SFTA3P0C7M3 94 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 ODF3L2Q3SX64 289 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 GOLT1AQ6ZVE7 132 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 TRAV8-1A0A0A6YYK1 113 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 F6UB75 175 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 IGLV2-11P01706 119 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 ADCYAP1P18509 176 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 OXLD1Q5BKU9 147 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 MAP6D1Q9H9H5 199 aa12.51□□□□□ -0.41
AP3S1-208ENST00000515066 CSN1S1P47710 185 aa12.5□□□□□ -0.41
AP3S1-208ENST00000515066 CEBPGP53567 150 aa12.5□□□□□ -0.41
AP3S1-208ENST00000515066 GDF5OSQ5U4N7 250 aa12.5□□□□□ -0.41
AP3S1-208ENST00000515066 PARLQ9H300 379 aa12.5□□□□□ -0.41
AP3S1-208ENST00000515066 KLF12Q9Y4X4 402 aa12.5□□□□□ -0.41
AP3S1-208ENST00000515066 TRBV20OR9-2A0A075B6H5 130 aa12.49□□□□□ -0.41
AP3S1-208ENST00000515066 TRAV34A0A0B4J273 112 aa12.49□□□□□ -0.41
AP3S1-208ENST00000515066 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
AP3S1-208ENST00000515066 CD7P09564 240 aa12.49□□□□□ -0.41
AP3S1-208ENST00000515066 RPL35P42766 123 aaKnown RBP12.49□□□□□ -0.41
AP3S1-208ENST00000515066 DEFB131AP59861 70 aa12.49□□□□□ -0.41
AP3S1-208ENST00000515066 VGLL1Q99990 258 aa12.49□□□□□ -0.41
AP3S1-208ENST00000515066 C19orf73Q9NVV2 129 aa12.49□□□□□ -0.41
AP3S1-208ENST00000515066 ZNF705DP0CH99 300 aaPredicted RBP12.48□□□□□ -0.41
AP3S1-208ENST00000515066 ZNF705BP0CI00 300 aaPredicted RBP12.48□□□□□ -0.41
AP3S1-208ENST00000515066 AKR1C3P42330 323 aa12.48□□□□□ -0.41
AP3S1-208ENST00000515066 ZNF124Q15973 351 aa12.48□□□□□ -0.41
AP3S1-208ENST00000515066 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
AP3S1-208ENST00000515066 SERTM2A0A1B0GWG4 89 aa12.48□□□□□ -0.41
AP3S1-208ENST00000515066 RBAKDNA6NC62 111 aa12.48□□□□□ -0.41
AP3S1-208ENST00000515066 OR8A1Q8NGG7 326 aa12.48□□□□□ -0.41
AP3S1-208ENST00000515066 CNN1P51911 297 aaKnown RBP12.47□□□□□ -0.41
AP3S1-208ENST00000515066 ERCC8Q13216 396 aa12.47□□□□□ -0.41
AP3S1-208ENST00000515066 TMEM183BQ1AE95 376 aa12.47□□□□□ -0.41
AP3S1-208ENST00000515066 SOHLH1Q5JUK2 328 aa12.47□□□□□ -0.41
AP3S1-208ENST00000515066 TMEM75Q8N9X5 138 aa12.47□□□□□ -0.41
AP3S1-208ENST00000515066 IGF2BP2-AS1Q96M15 143 aa12.47□□□□□ -0.41
AP3S1-208ENST00000515066 FAM110AQ9BQ89 295 aa12.47□□□□□ -0.41
AP3S1-208ENST00000515066 A0A0J9YX75 114 aa12.46□□□□□ -0.41
AP3S1-208ENST00000515066 ZNF674Q2M3X9 581 aa12.46□□□□□ -0.41
AP3S1-208ENST00000515066 C9orf47Q6ZRZ4 202 aa12.46□□□□□ -0.41
AP3S1-208ENST00000515066 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.41
AP3S1-208ENST00000515066 SMIM7Q9BQ49 75 aa12.46□□□□□ -0.41
AP3S1-208ENST00000515066 GPR61Q9BZJ8 451 aa12.46□□□□□ -0.41
AP3S1-208ENST00000515066 AGPAT4-IT1Q9H0P7 198 aa12.46□□□□□ -0.41
AP3S1-208ENST00000515066 SAV1Q9H4B6 383 aaPredicted RBP12.46□□□□□ -0.41
AP3S1-208ENST00000515066 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
AP3S1-208ENST00000515066 EGFEM1PQ0D2K5 195 aa12.45□□□□□ -0.42
AP3S1-208ENST00000515066 FOXI2Q6ZQN5 318 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms