RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TIGITQ495A1 244 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 CD300EQ496F6 205 aaPredicted RBP6.28□□□□□ -1.4
CCL28-204ENST00000514421 LCN12Q6JVE5 192 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 DYNLRB2Q8TF09 96 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 Q8WTZ3 238 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 ISOC2Q96AB3 205 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 ZNF414Q96IQ9 312 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 SHANK2-AS3Q9BTD1 123 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 DERL1Q9BUN8 251 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 DAZ1Q9NQZ3 744 aaKnown RBP6.28□□□□□ -1.4
CCL28-204ENST00000514421 RNF24Q9Y225 148 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 HIGD1AQ9Y241 93 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 KLF12Q9Y4X4 402 aa6.28□□□□□ -1.4
CCL28-204ENST00000514421 TRAV25A0A0B4J276 109 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 ZNF785A8K8V0 405 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 H3BRN7 92 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 MRPS12O15235 138 aaKnown RBP6.27□□□□□ -1.41
CCL28-204ENST00000514421 OR10J4P0C629 311 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 ORM2P19652 201 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
CCL28-204ENST00000514421 TAS2R60P59551 318 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 UBE2L3P68036 154 aaKnown RBP6.27□□□□□ -1.41
CCL28-204ENST00000514421 ADIRFQ15847 76 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 ZNF674Q2M3X9 581 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 TOMM20LQ6UXN7 152 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 ZNF600Q6ZNG1 722 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 S100A7AQ86SG5 101 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 FAM24BQ8N5W8 94 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 OR1B1Q8NGR6 318 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 SMIM12Q96EX1 92 aa6.27□□□□□ -1.41
CCL28-204ENST00000514421 SLC25A39Q9BZJ4 359 aaPredicted RBP6.27□□□□□ -1.41
CCL28-204ENST00000514421 IZUMO1RA6ND01 250 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 ZNF207O43670 478 aaKnown RBP6.26□□□□□ -1.41
CCL28-204ENST00000514421 NBEAP1P0C6P0 100 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 IGLC2P0DOY2 106 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 PYYP10082 97 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 EDN2P20800 178 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 RPL35P42766 123 aaKnown RBP6.26□□□□□ -1.41
CCL28-204ENST00000514421 SUMO1P63165 101 aaKnown RBP6.26□□□□□ -1.41
CCL28-204ENST00000514421 RBPMS2Q6ZRY4 209 aaKnown RBP6.26□□□□□ -1.41
CCL28-204ENST00000514421 Q8N1Y9 231 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 LYPD1Q8N2G4 141 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 ARL6IP6Q8N6S5 226 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 OCC1Q8TAD7 63 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 RNF125Q96EQ8 232 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 IGF2BP2-AS1Q96M15 143 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 SMPXQ9UHP9 88 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 SMAD5-AS1Q9Y6J3 95 aa6.26□□□□□ -1.41
CCL28-204ENST00000514421 DNAH9Q9NYC9 4486 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 TRAV9-1A0A075B6T8 112 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 IGHV3OR16-8A0A075B7F1 116 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 IGHV7-4-1A0A0J9YVY3 117 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 TRBV6-1A0A0K0K1D8 114 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 A0A1W2PS18 150 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 HELTA6NFD8 242 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 H7BYZ3 331 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 K7EN84 100 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 CHEK1O14757 476 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 PHOX2AO14813 284 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 IGLV2-8P01709 118 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 TYMSP04818 313 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 S100A9P06702 114 aaKnown RBP6.25□□□□□ -1.41
CCL28-204ENST00000514421 CXCL1P09341 107 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 HIST1H1EP10412 219 aaKnown RBP6.25□□□□□ -1.41
CCL28-204ENST00000514421 CRYBB3P26998 211 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 PDE6HQ13956 83 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 SFRP2Q96HF1 295 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 BTF3L4Q96K17 158 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 RHPN1-AS1Q9BWJ2 59 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 MLXQ9UH92 298 aa6.25□□□□□ -1.41
CCL28-204ENST00000514421 TRBV19A0A075B6N1 114 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 C1orf196B1AJZ1 125 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 PEX7O00628 323 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 ISLRO14498 428 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 GCGP01275 180 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 IL4P05112 153 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 S100A7P31151 101 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 BMI1P35226 326 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 RAB5BP61020 215 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 LYZP61626 148 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 USF2Q15853 346 aaPredicted RBP6.24□□□□□ -1.41
CCL28-204ENST00000514421 TMEM183BQ1AE95 376 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 GTSCR1Q86UQ5 136 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 BPIFA4PQ86YQ2 179 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 TMEM61Q8N0U2 210 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 FAM210BQ96KR6 192 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 METTL26Q96S19 204 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 B9D2Q9BPU9 175 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 ZFAND3Q9H8U3 227 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 OTORQ9NRC9 128 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 OSTCQ9NRP0 149 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 ZNF586Q9NXT0 402 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 EPDR1Q9UM22 224 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 TGP01266 2768 aa6.24□□□□□ -1.41
CCL28-204ENST00000514421 IGHV3OR16-13A0A075B7E8 117 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 TGIF2-C20orf24A0A0A6YYL0 155 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 IGHV3-74A0A0B4J1X5 117 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 ZNF98A6NK75 572 aa6.23□□□□□ -1.41
CCL28-204ENST00000514421 A8MZ25 164 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms