RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 COL7A1Q02388 2944 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 IGKV2-40A0A087WW87 121 aaPredicted RBP8.33□□□□□ -1.08
HTT-213ENST00000513806 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
HTT-213ENST00000513806 A0A0J9YX75 114 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 H3BMM0 161 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 CXorf1O96002 111 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 IGKV2D-40P01614 121 aaPredicted RBP8.33□□□□□ -1.08
HTT-213ENST00000513806 CMC4P56277 68 aaPredicted RBP8.33□□□□□ -1.08
HTT-213ENST00000513806 GNG5P63218 68 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 CCL20P78556 96 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 HIST1H1AQ02539 215 aaPredicted RBP8.33□□□□□ -1.08
HTT-213ENST00000513806 ERCC8Q13216 396 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 GUK1Q16774 197 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 HAGHQ16775 308 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 NBEAL2Q6ZNJ1 2754 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 TRPT1Q86TN4 253 aaKnown RBP8.33□□□□□ -1.08
HTT-213ENST00000513806 SFT2D1Q8WV19 159 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 FAM110AQ9BQ89 295 aa8.33□□□□□ -1.08
HTT-213ENST00000513806 YTHDF2Q9Y5A9 579 aaKnown RBP8.33□□□□□ -1.08
HTT-213ENST00000513806 PGPA6NDG6 321 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 A8MZ25 164 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 UMAD1C9J7I0 102 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 HLA-DRB4P13762 266 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 CNN1P51911 297 aaKnown RBP8.32□□□□□ -1.08
HTT-213ENST00000513806 PSG9Q00887 426 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 MBD3L1Q8WWY6 194 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 SLC35B3Q9H1N7 401 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 CLEC5AQ9NY25 188 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 HLA-DRB4X5D2U9 266 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 TENM3Q9P273 2699 aa8.32□□□□□ -1.08
HTT-213ENST00000513806 ZNF705EA8MWA4 302 aaPredicted RBP8.31□□□□□ -1.08
HTT-213ENST00000513806 ZNF253O75346 499 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 GIG44P09565 113 aaPredicted RBP8.31□□□□□ -1.08
HTT-213ENST00000513806 H2AFB1P0C5Y9 115 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 PDE6HQ13956 83 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 SAMD13Q5VXD3 122 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 EIF5AL1Q6IS14 154 aaKnown RBP8.31□□□□□ -1.08
HTT-213ENST00000513806 EBLN2Q6P2I7 272 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 OR8A1Q8NGG7 326 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 SUN5Q8TC36 379 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 AAMDCQ9H7C9 122 aa8.31□□□□□ -1.08
HTT-213ENST00000513806 GGTLC3B5MD39 225 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 J3KRW8 73 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 KIR3DS1Q14943 382 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 DEFB135Q30KP9 77 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 DPPA3Q6W0C5 159 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 SGK494Q96LW2 274 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 VGLL1Q99990 258 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 B9D2Q9BPU9 175 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 OTORQ9NRC9 128 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 TMEM167BQ9NRX6 74 aa8.3□□□□□ -1.08
HTT-213ENST00000513806 FAM74A7A6NL05 159 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 M0R2Z0 102 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 PAGE4O60829 102 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 CA1P00915 261 aaPredicted RBP8.29□□□□□ -1.08
HTT-213ENST00000513806 SLC25A5P05141 298 aaKnown RBP8.29□□□□□ -1.08
HTT-213ENST00000513806 ATP5G3P48201 142 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 SUMO1P63165 101 aaKnown RBP8.29□□□□□ -1.08
HTT-213ENST00000513806 SPINK13Q1W4C9 94 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 AMTNQ6UX39 209 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 Q8TAT8 98 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 CSTL1Q9H114 145 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 XCL2Q9UBD3 114 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 TGP01266 2768 aa8.29□□□□□ -1.08
HTT-213ENST00000513806 TRAV12-2A0A075B6T6 113 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 TRAV8-1A0A0A6YYK1 113 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 DIRC3C9JPN6 131 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 TEX46H3BTG2 121 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 CT45A10P0DMU9 189 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 RAB5CP51148 216 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 TEX261Q6UWH6 196 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 GOLT1AQ6ZVE7 132 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 MRPL53Q96EL3 112 aaKnown RBP8.28□□□□□ -1.08
HTT-213ENST00000513806 AGPAT4-IT1Q9H0P7 198 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 GNG13Q9P2W3 67 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 PRELID1Q9Y255 219 aa8.28□□□□□ -1.08
HTT-213ENST00000513806 NPIPB6E9PJ23 425 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 PRM2P04554 102 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 APOC4P55056 127 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 CST9LP1Q5W188 147 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 LYPD1Q8N2G4 141 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 ZNF680Q8NEM1 530 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 OR10J6PQ8NGY7 276 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 CMTM2Q8TAZ6 248 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 LINC00479Q96M42 142 aa8.27□□□□□ -1.09
HTT-213ENST00000513806 TRAV34A0A0B4J273 112 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 A0A1W2PRE2 83 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 A8MTW9 85 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 DUSP14O95147 198 aaKnown RBP8.26□□□□□ -1.09
HTT-213ENST00000513806 RBMY1A1P0DJD3 496 aaKnown RBP8.26□□□□□ -1.09
HTT-213ENST00000513806 RBMY1CP0DJD4 496 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 CSN1S1P47710 185 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 RBMY1FQ15415 496 aaKnown RBP8.26□□□□□ -1.09
HTT-213ENST00000513806 PRR9Q5T870 116 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 Q6ZQT7 251 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 TM2D3Q9BRN9 247 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 PPP1R14DQ9NXH3 145 aa8.26□□□□□ -1.09
HTT-213ENST00000513806 IGHV3OR16-12A0A075B7B8 117 aa8.25□□□□□ -1.09
HTT-213ENST00000513806 TRAV1-1A0A0B4J248 108 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms