RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 SAP30O75446 220 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 ZNF833PQ6ZTB9 187 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 DEFB125Q8N687 156 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 TRBV19A0A075B6N1 114 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 IGHG3P01860 377 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 KLF5Q13887 457 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-209ENST00000513761 LYPD1Q8N2G4 141 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 DYNLRB2Q8TF09 96 aa6.22□□□□□ -1.41
CLCN3-209ENST00000513761 IGKV3D-20A0A0C4DH25 116 aa6.21□□□□□ -1.41
CLCN3-209ENST00000513761 LY6HO94772 140 aa6.21□□□□□ -1.41
CLCN3-209ENST00000513761 CIRBPQ14011 172 aaKnown RBP6.21□□□□□ -1.41
CLCN3-209ENST00000513761 SPRNQ5BIV9 151 aa6.21□□□□□ -1.41
CLCN3-209ENST00000513761 C17orf77Q96MU5 243 aa6.21□□□□□ -1.41
CLCN3-209ENST00000513761 TRAV21A0A0B4J279 112 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 IGKV3OR2-268A0A0C4DH90 116 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 TMEM75Q8N9X5 138 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 WIPF2Q8TF74 440 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-209ENST00000513761 DKK2Q9UBU2 259 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 A0A1W2PPM0 123 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 C14orf178Q8N769 122 aaPredicted RBP6.21□□□□□ -1.42
CLCN3-209ENST00000513761 NPYP01303 97 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 PLNP26678 52 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 RNF182Q8N6D2 247 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 Q8TCH9 128 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 ZNF747Q9BV97 191 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 H7C1H1 209 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.42
CLCN3-209ENST00000513761 KLRB1Q12918 225 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 PCP2Q8IVA1 136 aa6.21□□□□□ -1.42
CLCN3-209ENST00000513761 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 DLX4Q92988 240 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-209ENST00000513761 EML6Q6ZMW3 1958 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 TRAV12-3A0A0B4J271 114 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 MBD3L4A6NDZ8 208 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-209ENST00000513761 MBD3L3A6NE82 208 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-209ENST00000513761 MBD3L5A6NJ08 208 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-209ENST00000513761 C5orf64Q2M2E5 130 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 LGALS9BQ3B8N2 356 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 FAM120AOSQ5T036 256 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 LGALS9CQ6DKI2 356 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 AMTNQ6UX39 209 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 MBD3L2Q8NHZ7 208 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-209ENST00000513761 SPINK8P0C7L1 97 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 SNRPD3P62318 126 aaKnown RBP6.2□□□□□ -1.42
CLCN3-209ENST00000513761 ZNF672Q499Z4 452 aaPredicted RBP6.2□□□□□ -1.42
CLCN3-209ENST00000513761 DDB2Q92466 427 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 IGF2BP2-AS1Q96M15 143 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 VCX2Q9H322 139 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 TNCP24821 2201 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 TRAV26-2A0A0B4J265 109 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 PRSS46E5RG02 174 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 C10orf126Q8N4M7 172 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 MED12LQ86YW9 2145 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 IGKV1OR2-108A0A075B7D4 117 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 LTAP01374 205 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 TMEM95Q3KNT9 176 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 ZNF562Q6V9R5 426 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 SIGLEC15Q6ZMC9 328 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 TP73-AS1Q9UF72 201 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
CLCN3-209ENST00000513761 H3BMG7 143 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 NPC2P61916 151 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 ADAMTS9Q9P2N4 1935 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 C2orf16Q68DN1 1984 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 LINC01559Q495D7 138 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 C1orf122Q6ZSJ8 110 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 A0A0U1RRA0 63 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 NPFFO15130 113 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 RNASE1P07998 156 aaKnown RBP6.19□□□□□ -1.42
CLCN3-209ENST00000513761 POU2AF1Q16633 256 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 RAX2Q96IS3 184 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.19□□□□□ -1.42
CLCN3-209ENST00000513761 SCGB1A1P11684 91 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 ANKRD39Q53RE8 183 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 A0A0G2JNJ9 132 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 TAX1BP3O14907 124 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 COL8A2P25067 703 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 TMEM219Q86XT9 240 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 THAP8Q8NA92 274 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 Q9UFV3 132 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 ERG28Q9UKR5 140 aa6.19□□□□□ -1.42
CLCN3-209ENST00000513761 NDUFS7O75251 213 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 PAX8Q06710 450 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 PATE2Q6UY27 113 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 CSTL1Q9H114 145 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 MRPL35Q9NZE8 188 aaKnown RBP6.18□□□□□ -1.42
CLCN3-209ENST00000513761 ARFGEF3Q5TH69 2177 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 TMEM262E9PQX1 116 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 PAX1P15863 534 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 AZU1P20160 251 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 ZFAND6Q6FIF0 208 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 IL17RELQ6ZVW7 336 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 NUP37Q8NFH4 326 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 IGLV1-44P01699 117 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 IGLC1P0CG04 106 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 GATA4P43694 442 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 PDE6HQ13956 83 aa6.18□□□□□ -1.42
CLCN3-209ENST00000513761 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms