RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-218ENST00000513506 CXorf1O96002 111 aa11.37□□□□□ -0.59
POLR2J3-218ENST00000513506 HLA-DMBP28068 263 aa11.37□□□□□ -0.59
POLR2J3-218ENST00000513506 UBE2L3P68036 154 aaKnown RBP11.37□□□□□ -0.59
POLR2J3-218ENST00000513506 SSX7Q7RTT5 188 aa11.37□□□□□ -0.59
POLR2J3-218ENST00000513506 OR8A1Q8NGG7 326 aa11.37□□□□□ -0.59
POLR2J3-218ENST00000513506 MBD3L1Q8WWY6 194 aa11.37□□□□□ -0.59
POLR2J3-218ENST00000513506 F6UB75 175 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 SNRPCP09234 159 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 OR10J4P0C629 311 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 ARL14EPLP0DKL9 152 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 RPL35AP18077 110 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 GCHFRP30047 84 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 RAB5CP51148 216 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 DEFB1P60022 68 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 NUTF2P61970 127 aaKnown RBP11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 CSNK1G2-AS1Q8NCQ2 148 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 RNF183Q96D59 192 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 PHYHIPLQ96FC7 376 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 ASCL2Q99929 193 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 TMEM167BQ9NRX6 74 aa11.36□□□□□ -0.59
POLR2J3-218ENST00000513506 CNN1P51911 297 aaKnown RBP11.35□□□□□ -0.59
POLR2J3-218ENST00000513506 BLNKQ8WV28 456 aa11.35□□□□□ -0.59
POLR2J3-218ENST00000513506 TMED6Q8WW62 240 aa11.35□□□□□ -0.59
POLR2J3-218ENST00000513506 ODF3Q96PU9 254 aa11.35□□□□□ -0.59
POLR2J3-218ENST00000513506 OVOL2Q9BRP0 275 aa11.35□□□□□ -0.59
POLR2J3-218ENST00000513506 AAMDCQ9H7C9 122 aa11.35□□□□□ -0.59
POLR2J3-218ENST00000513506 ZMAT4Q9H898 229 aa11.35□□□□□ -0.59
POLR2J3-218ENST00000513506 AGRNO00468 2067 aa11.34□□□□□ -0.59
POLR2J3-218ENST00000513506 ZNF705FA8MVS1 300 aaPredicted RBP11.34□□□□□ -0.59
POLR2J3-218ENST00000513506 PRAC2D3DTV9 90 aa11.34□□□□□ -0.59
POLR2J3-218ENST00000513506 NPIPB6E9PJ23 425 aa11.34□□□□□ -0.59
POLR2J3-218ENST00000513506 EXOC3-AS1Q8N2X6 119 aa11.34□□□□□ -0.59
POLR2J3-218ENST00000513506 C1QTNF4Q9BXJ3 329 aa11.34□□□□□ -0.59
POLR2J3-218ENST00000513506 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
POLR2J3-218ENST00000513506 TRAV1-1A0A0B4J248 108 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 A0A1W2PRE2 83 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 M0R3E3 92 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 EIF3GO75821 320 aaKnown RBP eCLIP11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 AMBPP02760 352 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 SLC25A5P05141 298 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 FHITP49789 147 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 SULT1A2P50226 295 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 RANP62826 216 aaKnown RBP11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 ICAM4Q14773 271 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 C9orf47Q6ZRZ4 202 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 RXFP4Q8TDU9 374 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 Q9H3A6 140 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 PPP1R14DQ9NXH3 145 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 ARL2-SNX15V9GYD0 113 aa11.33□□□□□ -0.6
POLR2J3-218ENST00000513506 TRBV7-9A0A0J9YWB2 115 aa11.32□□□□□ -0.6
POLR2J3-218ENST00000513506 RBAKDNA6NC62 111 aa11.32□□□□□ -0.6
POLR2J3-218ENST00000513506 HMGB3O15347 200 aaKnown RBP11.32□□□□□ -0.6
POLR2J3-218ENST00000513506 SPRY2O43597 315 aa11.32□□□□□ -0.6
POLR2J3-218ENST00000513506 CA1P00915 261 aaPredicted RBP11.32□□□□□ -0.6
POLR2J3-218ENST00000513506 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
POLR2J3-218ENST00000513506 U3KQK5 164 aa11.32□□□□□ -0.6
POLR2J3-218ENST00000513506 MAP1LC3B2A6NCE7 125 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 ZNF705EA8MWA4 302 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 NMBP08949 121 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 PMS2P11Q13670 270 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 OR4B1Q8NGF8 309 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 LINC00477Q96M19 166 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 RCHY1Q96PM5 261 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 NKX6-2Q9C056 277 aaPredicted RBP11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 MAP1LC3BQ9GZQ8 125 aa11.31□□□□□ -0.6
POLR2J3-218ENST00000513506 NKX2-5P52952 324 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-218ENST00000513506 HIST1H1AQ02539 215 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-218ENST00000513506 FAM74A1Q5RGS3 127 aa11.3□□□□□ -0.6
POLR2J3-218ENST00000513506 ZNF705AQ6ZN79 300 aaPredicted RBP11.3□□□□□ -0.6
POLR2J3-218ENST00000513506 SLC35B3Q9H1N7 401 aa11.3□□□□□ -0.6
POLR2J3-218ENST00000513506 PGPA6NDG6 321 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 DIRC3C9JPN6 131 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 BOLA2-SMG1P6H3BVE0 249 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 CRXO43186 299 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 ZNF705DP0CH99 300 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 ZNF705BP0CI00 300 aaPredicted RBP11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 CT45A10P0DMU9 189 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 CSN1S1P47710 185 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 DEFB135Q30KP9 77 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 FAM213BQ8TBF2 198 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 IGF2BP2-AS1Q96M15 143 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 NEU1Q99519 415 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 AGPAT4-IT1Q9H0P7 198 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 LENEPQ9Y5L5 61 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 DNAH7Q8WXX0 4024 aa11.29□□□□□ -0.6
POLR2J3-218ENST00000513506 SERTM2A0A1B0GWG4 89 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 GGTLC3B5MD39 225 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 H2AFB1P0C5Y9 115 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 CRISP2P16562 243 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 SFT2D1Q8WV19 159 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 TCEAL7Q9BRU2 100 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 TMPRSS5Q9H3S3 457 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 RETNQ9HD89 108 aa11.28□□□□□ -0.6
POLR2J3-218ENST00000513506 FAM74A7A6NL05 159 aa11.27□□□□□ -0.61
POLR2J3-218ENST00000513506 IGKV3-20P01619 116 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms