RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 GATA2P23769 480 aaPredicted RBP3.12□□□□□ -1.91
HTT-211ENST00000513326 PSMA1P25786 263 aaKnown RBP3.12□□□□□ -1.91
HTT-211ENST00000513326 RPL5P46777 297 aaKnown RBP3.12□□□□□ -1.91
HTT-211ENST00000513326 MEF2DQ14814 521 aa3.12□□□□□ -1.91
HTT-211ENST00000513326 SPATA31B1PQ5VZV4 182 aa3.12□□□□□ -1.91
HTT-211ENST00000513326 FAAP20Q6NZ36 180 aa3.12□□□□□ -1.91
HTT-211ENST00000513326 LYPD5Q6UWN5 251 aa3.12□□□□□ -1.91
HTT-211ENST00000513326 OR10J6PQ8NGY7 276 aa3.12□□□□□ -1.91
HTT-211ENST00000513326 TMEM263Q8WUH6 116 aaKnown RBP3.12□□□□□ -1.91
HTT-211ENST00000513326 ZNF2Q9BSG1 426 aaPredicted RBP3.12□□□□□ -1.91
HTT-211ENST00000513326 Q9HAA7 133 aa3.12□□□□□ -1.91
HTT-211ENST00000513326 GPN1Q9HCN4 374 aaPredicted RBP3.12□□□□□ -1.91
HTT-211ENST00000513326 LY96Q9Y6Y9 160 aa3.12□□□□□ -1.91
HTT-211ENST00000513326 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.11□□□□□ -1.91
HTT-211ENST00000513326 TRAV30A0A087WSZ9 112 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 TRAV1-2A0A0B4J238 106 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 GPR31O00270 319 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 CASQ2O14958 399 aaPredicted RBP3.11□□□□□ -1.91
HTT-211ENST00000513326 GSTZ1O43708 216 aaPredicted RBP3.11□□□□□ -1.91
HTT-211ENST00000513326 ATP6V1G1O75348 118 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 CRYGDP07320 174 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 RAB3BP20337 219 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 FHITP49789 147 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 TAS2R20P59543 309 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 LYZP61626 148 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 SUPT4H1P63272 117 aaKnown RBP3.11□□□□□ -1.91
HTT-211ENST00000513326 HIST1H1AQ02539 215 aaPredicted RBP3.11□□□□□ -1.91
HTT-211ENST00000513326 OR2F1Q13607 317 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 C22orf42Q6IC83 251 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 TP53RKQ96S44 253 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 RSG1Q9BU20 258 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 PARLQ9H300 379 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 AUNIPQ9H7T9 357 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 RPRMQ9NS64 109 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 RHBDL2Q9NX52 303 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 FAT4Q6V0I7 4981 aa3.11□□□□□ -1.91
HTT-211ENST00000513326 IGHV3-38A0A0C4DH36 116 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 LINC00854A0A1B0GVQ3 168 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 CORTO00230 105 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 PDCD5O14737 125 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 RS1O15537 224 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 PSCAO43653 123 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 RLN2P04090 185 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 HTR2BP41595 481 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 RPL37AP61513 92 aaKnown RBP3.1□□□□□ -1.91
HTT-211ENST00000513326 MLLT11Q13015 90 aaPredicted RBP3.1□□□□□ -1.91
HTT-211ENST00000513326 ARL6IP1Q15041 203 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 SP6Q3SY56 376 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 ZFP1Q6P2D0 407 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 C8orf59Q8N0T1 100 aaPredicted RBP3.1□□□□□ -1.91
HTT-211ENST00000513326 OR8I2Q8N0Y5 310 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 DHRSXQ8N5I4 330 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 ZNF738Q8NE65 137 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 C11orf52Q96A22 123 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 MGLLQ99685 303 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 SLC25A22Q9H936 323 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 ANAPC10Q9UM13 185 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 STRAPQ9Y3F4 350 aaKnown RBP3.1□□□□□ -1.91
HTT-211ENST00000513326 ICOSQ9Y6W8 199 aa3.1□□□□□ -1.91
HTT-211ENST00000513326 IGKV1OR2-108A0A075B7D4 117 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 ZNF98A6NK75 572 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 H7BYZ3 331 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 H7C423 109 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 ZNF324O75467 553 aaPredicted RBP3.09□□□□□ -1.91
HTT-211ENST00000513326 DUSP14O95147 198 aaKnown RBP3.09□□□□□ -1.91
HTT-211ENST00000513326 SNRPCP09234 159 aaKnown RBP3.09□□□□□ -1.91
HTT-211ENST00000513326 OR5AC1P0C628 307 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 SLC25A4P12235 298 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 MYL9P24844 172 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 PSMB9P28065 219 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 HLA-DMAP28067 261 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 HRH1P35367 487 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 AKR1C2P52895 323 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 SUB1P53999 127 aaKnown RBP eCLIP3.09□□□□□ -1.91
HTT-211ENST00000513326 B2MP61769 119 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 RHOBP62745 196 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 RIGQ13278 110 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 TRAM1Q15629 374 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 C2orf83Q53S99 150 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 OR8G2PQ6IF36 304 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 SFXN4Q6P4A7 337 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 ZNF493Q6ZR52 646 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 CMTM1Q8IZ96 169 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 TMEM256Q8N2U0 113 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 C11orf72Q8NBR9 251 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 OR8A1Q8NGG7 326 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 LHFPL5Q8TAF8 219 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 SPXQ9BT56 116 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 KRTAP2-2Q9BYT5 123 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 CCDC90BQ9GZT6 254 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 ACOT13Q9NPJ3 140 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 RCL1Q9Y2P8 373 aaKnown RBP3.09□□□□□ -1.91
HTT-211ENST00000513326 RRP15Q9Y3B9 282 aaKnown RBP3.09□□□□□ -1.91
HTT-211ENST00000513326 KLF12Q9Y4X4 402 aa3.09□□□□□ -1.91
HTT-211ENST00000513326 TRGV2A0A075B6R0 118 aa3.08□□□□□ -1.92
HTT-211ENST00000513326 TRGV1A0A0A0MS02 117 aa3.08□□□□□ -1.92
HTT-211ENST00000513326 LOC100131303A0A0U1RQF7 123 aa3.08□□□□□ -1.92
HTT-211ENST00000513326 TRDV1A0A1B0GX56 115 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms