RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 ZNF738Q8NE65 137 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 SUN5Q8TC36 379 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 MBD3L1Q8WWY6 194 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 ANAPC16Q96DE5 110 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 MRPL53Q96EL3 112 aaKnown RBP5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 LINC00052Q96N35 136 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 TUBA4BQ9H853 241 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 PRELID1Q9Y255 219 aa5.62□□□□□ -1.51
HMGXB3-204ENST00000513318 TEX46H3BTG2 121 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 HBE1P02100 147 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 HLA-DMBP28068 263 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 FGF8P55075 233 aaPredicted RBP5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 ICAM4Q14773 271 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 ZNF124Q15973 351 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 FAM74A1Q5RGS3 127 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 IGFL4Q6B9Z1 124 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 EBLN2Q6P2I7 272 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 STHQ8IWL8 128 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 RPUSD4Q96CM3 377 aaKnown RBP5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 C20orf173Q96LM9 149 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 Q9H3A6 140 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 SAV1Q9H4B6 383 aaPredicted RBP5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 ARL2-SNX15V9GYD0 113 aa5.61□□□□□ -1.51
HMGXB3-204ENST00000513318 LOC102724200A0A096LPH7 203 aaPredicted RBP5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 TRAV1-1A0A0B4J248 108 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 A0A0J9YX75 114 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 A0A1W2PRE2 83 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 ZNF705EA8MWA4 302 aaPredicted RBP5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 M0R3E3 92 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 FRMD6-AS1P0C7T7 363 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 HLA-DRB4P13762 266 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 PPT1P50897 306 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 RANP62826 216 aaKnown RBP5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 DEFB121Q5J5C9 76 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 ACTL10Q5JWF8 245 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 TEX261Q6UWH6 196 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 TRPT1Q86TN4 253 aaKnown RBP5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 EXOC3-AS1Q8N2X6 119 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 SFT2D1Q8WV19 159 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 CLUHP3Q96NS8 147 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 OTORQ9NRC9 128 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 HLA-DRB4X5D2U9 266 aa5.6□□□□□ -1.51
HMGXB3-204ENST00000513318 KIR2DL5BA0A0G2JN68 375 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 KIR2DL5BA0A0G2JPC4 375 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 A0A1B0GV50 99 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 RBMY1BA6NDE4 496 aaKnown RBP5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 RBMY1EA6NEQ0 496 aaKnown RBP5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 KNCNA6PVL3 124 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 F6UB75 175 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 H3BMM0 161 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 DUSP14O95147 198 aaKnown RBP5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 IFNA7P01567 189 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 RBMY1DP0C7P1 496 aaKnown RBP5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 CSN1S1P47710 185 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 APOC4P55056 127 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 DEFB1P60022 68 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 NUTF2P61970 127 aaKnown RBP5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 BLOC1S1P78537 153 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 ANKRD39Q53RE8 183 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 GDF5OSQ5U4N7 250 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 LINC00322Q6ZN03 302 aaPredicted RBP5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 KIR2DL5AQ8N109 375 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 ARL6IP6Q8N6S5 226 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 C5orf17Q8NAS9 161 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 OR8A1Q8NGG7 326 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 KIR2DL5BQ8NHK3 375 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 CMTM2Q8TAZ6 248 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 RXFP4Q8TDU9 374 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 NKX6-2Q9C056 277 aaPredicted RBP5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 TMPRSS5Q9H3S3 457 aa5.59□□□□□ -1.51
HMGXB3-204ENST00000513318 SERTM2A0A1B0GWG4 89 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 RBAKDNA6NC62 111 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 PGPA6NDG6 321 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 FAM74A7A6NL05 159 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 A8MTW9 85 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 ZNF705FA8MVS1 300 aaPredicted RBP5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 GGTLC3B5MD39 225 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 SLC25A5P05141 298 aaKnown RBP5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 RPL35AP18077 110 aaKnown RBP5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 CNN1P51911 297 aaKnown RBP5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 UBE2G2P60604 165 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 HIST1H1AQ02539 215 aaPredicted RBP5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 MORN3Q6PF18 240 aaPredicted RBP5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 ZNF680Q8NEM1 530 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 OR4B1Q8NGF8 309 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 OR10J6PQ8NGY7 276 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 B9D2Q9BPU9 175 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 MANBALQ9NQG1 85 aa5.58□□□□□ -1.52
HMGXB3-204ENST00000513318 IGKV2-40A0A087WW87 121 aaPredicted RBP5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 DIRC3C9JPN6 131 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 PRAC2D3DTV9 90 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 NPIPB6E9PJ23 425 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 PAGE4O60829 102 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 IFNA1P01562 189 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 IGKV2D-40P01614 121 aaPredicted RBP5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 ZNF705DP0CH99 300 aaPredicted RBP5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 ZNF705BP0CI00 300 aaPredicted RBP5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 SUMO1P63165 101 aaKnown RBP5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
HMGXB3-204ENST00000513318 LYPD6BQ8NI32 183 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms