RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ATP5G3P48201 142 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 HAGHQ16775 308 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 ODF3L2Q3SX64 289 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 ARL6IP6Q8N6S5 226 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 LINC00052Q96N35 136 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 FAM210AQ96ND0 272 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 FAM110AQ9BQ89 295 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 MAP6D1Q9H9H5 199 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 VAX2Q9UIW0 290 aa9.33□□□□□ -0.92
PDPN-210ENST00000513143 LOC102723971A0A1B0GUV8 181 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 ZNF705FA8MVS1 300 aaPredicted RBP9.32□□□□□ -0.92
PDPN-210ENST00000513143 M0R3E3 92 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 CD7P09564 240 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 KRTAP10-11P60412 298 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 LINC01559Q495D7 138 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 PSMG4Q5JS54 123 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 ZNF506Q5JVG8 444 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 C5orf17Q8NAS9 161 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 ZNF738Q8NE65 137 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 RXFP4Q8TDU9 374 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 RARRES2Q99969 163 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 TXNDC17Q9BRA2 123 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 C19orf73Q9NVV2 129 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 AGRNO00468 2067 aa9.32□□□□□ -0.92
PDPN-210ENST00000513143 OR11H12B2RN74 326 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 C11orf94C9JXX5 98 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 SLC25A5P05141 298 aaKnown RBP9.31□□□□□ -0.92
PDPN-210ENST00000513143 DEFB131AP59861 70 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 CD81P60033 236 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 MEF2BQ02080 365 aaPredicted RBP9.31□□□□□ -0.92
PDPN-210ENST00000513143 GTSCR1Q86UQ5 136 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 CMTM2Q8TAZ6 248 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 RPUSD4Q96CM3 377 aaKnown RBP9.31□□□□□ -0.92
PDPN-210ENST00000513143 TCEAL7Q9BRU2 100 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 MED9Q9NWA0 146 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 EPDR1Q9UM22 224 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 MGAM2Q2M2H8 2515 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 DIRC3C9JPN6 131 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 CSN1S1P47710 185 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 TOR2AQ5JU69 321 aa9.31□□□□□ -0.92
PDPN-210ENST00000513143 KPRPQ5T749 579 aaPredicted RBP9.31□□□□□ -0.92
PDPN-210ENST00000513143 EIF5A2Q9GZV4 153 aaKnown RBP9.31□□□□□ -0.92
PDPN-210ENST00000513143 RAB19A4D1S5 217 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 LINC00862A6NCI5 91 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 PRAC2D3DTV9 90 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 NDUFS6O75380 124 aaKnown RBP9.3□□□□□ -0.92
PDPN-210ENST00000513143 TCRAP04437 139 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 DEFB1P60022 68 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 GNG5P63218 68 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 FOXI2Q6ZQN5 318 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 APRG1Q8IVJ8 170 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 Q8N1Y9 231 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 HIST1H2BAQ96A08 127 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 PRR25Q96S07 402 aa9.3□□□□□ -0.92
PDPN-210ENST00000513143 SAV1Q9H4B6 383 aaPredicted RBP9.3□□□□□ -0.92
PDPN-210ENST00000513143 A0A0J9YX75 114 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 SERTM2A0A1B0GWG4 89 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 RBAKDNA6NC62 111 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 F6UB75 175 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 F6UZH7 168 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 PEX7O00628 323 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 PDE6DO43924 150 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 PEA15Q15121 130 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 ZNF124Q15973 351 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 GDF5OSQ5U4N7 250 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 OR8A1Q8NGG7 326 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 C11orf52Q96A22 123 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 ATG101Q9BSB4 218 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 SMDT1Q9H4I9 107 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 RPH3ALQ9UNE2 315 aa9.29□□□□□ -0.92
PDPN-210ENST00000513143 IGKV2-40A0A087WW87 121 aaPredicted RBP9.28□□□□□ -0.92
PDPN-210ENST00000513143 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 KNCNA6PVL3 124 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 IGKV2D-40P01614 121 aaPredicted RBP9.28□□□□□ -0.92
PDPN-210ENST00000513143 PRB4P10163 310 aaPredicted RBP9.28□□□□□ -0.92
PDPN-210ENST00000513143 HLA-DRB4P13762 266 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 SRSF3P84103 164 aaKnown RBP9.28□□□□□ -0.92
PDPN-210ENST00000513143 EBLN2Q6P2I7 272 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 GOLT1AQ6ZVE7 132 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 CYB561D1Q8N8Q1 229 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 OR10J6PQ8NGY7 276 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 WFDC10AQ9H1F0 79 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 HLA-DRB4X5D2U9 266 aa9.28□□□□□ -0.92
PDPN-210ENST00000513143 NBEAL1Q6ZS30 2694 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 NOTCH1P46531 2555 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 NPIPB6E9PJ23 425 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 TMEM250H0YL14 139 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 H3BMM0 161 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 K7EQM0 130 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 DUSP14O95147 198 aaKnown RBP9.27□□□□□ -0.93
PDPN-210ENST00000513143 SRP19P09132 144 aaKnown RBP9.27□□□□□ -0.93
PDPN-210ENST00000513143 ZNF705DP0CH99 300 aaPredicted RBP9.27□□□□□ -0.93
PDPN-210ENST00000513143 ZNF705BP0CI00 300 aaPredicted RBP9.27□□□□□ -0.93
PDPN-210ENST00000513143 ACTL10Q5JWF8 245 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 C9orf47Q6ZRZ4 202 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 DEFB125Q8N687 156 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 C2CD4CQ8TF44 421 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 CITED4Q96RK1 184 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 VGLL1Q99990 258 aa9.27□□□□□ -0.93
PDPN-210ENST00000513143 KLF12Q9Y4X4 402 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms