RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 SOHLH1Q5JUK2 328 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 FAM223AQ8IWN6 122 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 NECAP1Q8NC96 275 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 OR9G4Q8NGQ1 327 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 OR1L8Q8NGR8 309 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 OR4A5Q8NH83 315 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 MCFD2Q8NI22 146 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 COQ8AQ8NI60 647 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 C15orf40Q8WUR7 153 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 LINC00477Q96M19 166 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 TMEM56Q96MV1 263 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 B9D2Q9BPU9 175 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 MCUBQ9NWR8 336 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 PAIP2BQ9ULR5 123 aaKnown RBP2.64□□□□□ -1.99
HTT-210ENST00000512909 ZNF257Q9Y2Q1 563 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 U3KQK5 164 aa2.64□□□□□ -1.99
HTT-210ENST00000512909 IGLV1-50A0A075B6I6 118 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 IGHV3-49A0A0A0MS15 119 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.63□□□□□ -1.99
HTT-210ENST00000512909 TRBV7-1A0A0A6YYK4 115 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 C3orf85A0A1B0GTC6 90 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 IZUMO1RA6ND01 250 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 OR2T8A6NH00 312 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 AKAIN1P0CW23 69 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 ETV6P41212 452 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 RPL5P46777 297 aaKnown RBP2.63□□□□□ -1.99
HTT-210ENST00000512909 PIGPP57054 158 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 SPCS2Q15005 226 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 MRPL23Q16540 153 aaKnown RBP2.63□□□□□ -1.99
HTT-210ENST00000512909 SBSPONQ8IVN8 264 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 SLC35G3Q8N808 338 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 TMEM229BQ8NBD8 167 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 TERB2Q8NHR7 220 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 LYPD6BQ8NI32 183 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 GPX8Q8TED1 209 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 MRGPRFQ96AM1 343 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 CAMK2N2Q96S95 79 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 TSC22D3Q99576 134 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 OR51M1Q9H341 326 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 BET1LQ9NYM9 111 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 RSL24D1Q9UHA3 163 aaKnown RBP2.63□□□□□ -1.99
HTT-210ENST00000512909 PRNDQ9UKY0 176 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 STAB1Q9NY15 2570 aa2.63□□□□□ -1.99
HTT-210ENST00000512909 CUBNO60494 3623 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 C2orf70A6NJV1 201 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 CEBPZOSA8MTT3 80 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 OR11H12B2RN74 326 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 GABARAPH6UMI1 98 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 DNASE2O00115 360 aaPredicted RBP2.62□□□□□ -1.99
HTT-210ENST00000512909 RBFOX2O43251 390 aaKnown RBP eCLIP2.62□□□□□ -1.99
HTT-210ENST00000512909 GNG7O60262 68 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 ZNF324O75467 553 aaPredicted RBP2.62□□□□□ -1.99
HTT-210ENST00000512909 IGLV1-51P01701 117 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 CTRB1P17538 263 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 CBLN1P23435 193 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 TMBIM6P55061 237 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 HSPE1P61604 102 aaKnown RBP2.62□□□□□ -1.99
HTT-210ENST00000512909 MSMO1Q15800 293 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 DEFB114Q30KQ6 69 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 SMUG1Q53HV7 270 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 ZFAND6Q6FIF0 208 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 LAMTOR1Q6IAA8 161 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 SLC16A13Q7RTY0 426 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 TMED4Q7Z7H5 227 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 Q8N402 240 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 DEFB125Q8N687 156 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 OR13C8Q8NGS7 320 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 OR10J6PQ8NGY7 276 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 MYOZ3Q8TDC0 251 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 RAB2BQ8WUD1 216 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 CACNG8Q8WXS5 425 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 FRZBQ92765 325 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 LSM10Q969L4 123 aaKnown RBP2.62□□□□□ -1.99
HTT-210ENST00000512909 SCGB3A2Q96PL1 93 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 TIMM17AQ99595 171 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 FXYD6Q9H0Q3 95 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 MIXL1Q9H2W2 232 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.62□□□□□ -1.99
HTT-210ENST00000512909 C21orf62Q9NYP8 219 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 COMMD9Q9P000 198 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 MTFP1Q9UDX5 166 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 SCP2D1Q9UJQ7 156 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 UFC1Q9Y3C8 167 aa2.62□□□□□ -1.99
HTT-210ENST00000512909 TENM1Q9UKZ4 2725 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 TRAV14DV4A0A0A6YYC5 116 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 TRBV9A0A0B4J1U6 114 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 A0A1B0GW64 132 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 C7orf66A4D0T2 115 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 TGOLN2O43493 480 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 MT-CO2P00403 227 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 IFNA10P01566 189 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 CRYGCP07315 174 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 CD7P09564 240 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 OR5AC1P0C628 307 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 NPPCP23582 126 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 FAUP35544 74 aaKnown RBP2.61□□□□□ -1.99
HTT-210ENST00000512909 OPRK1P41145 380 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 PAFAH1B2P68402 229 aa2.61□□□□□ -1.99
HTT-210ENST00000512909 MRPS10P82664 201 aaKnown RBP2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms