RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 NREPQ16612 68 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 NRGNQ92686 78 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 MYH4Q9Y623 1939 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 TRAV9-1A0A075B6T8 112 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 IGHV4OR15-8A0A075B7B6 117 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 A0A087WW49 117 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 DEFB131BA0A096LNP1 70 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 IGLV3-21P80748 117 aaPredicted RBP7.15□□□□□ -1.27
VCAN-208ENST00000512590 ZNF837Q96EG3 531 aaPredicted RBP7.15□□□□□ -1.27
VCAN-208ENST00000512590 MRPL53Q96EL3 112 aaKnown RBP7.15□□□□□ -1.27
VCAN-208ENST00000512590 CITED1Q99966 193 aa7.15□□□□□ -1.27
VCAN-208ENST00000512590 TRPM3Q9HCF6 1732 aaPredicted RBP7.14□□□□□ -1.27
VCAN-208ENST00000512590 NCR3O14931 201 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 NDUFA11Q86Y39 141 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 KLK12Q9UKR0 248 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 ZNF706Q9Y5V0 76 aaPredicted RBP7.14□□□□□ -1.27
VCAN-208ENST00000512590 LINC00271P0C7V0 271 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 NTF4P34130 210 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 SERP1Q9Y6X1 66 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 HHLA3Q9XRX5 114 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 NUP98P52948 1817 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 IGHV4-30-2A0A087WSY4 118 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 K7EQD1 137 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 UBE2CO00762 179 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 FGF16O43320 207 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 DDTP30046 118 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 XAF1Q6GPH4 301 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 SHISA9B4DS77 424 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 IGHG2P01859 326 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 ACYP1P07311 99 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 ORMDL1Q9P0S3 153 aa7.14□□□□□ -1.27
VCAN-208ENST00000512590 H3BUA1 57 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 J3QL48 77 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 MAJINQ3KP22 176 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 UTF1Q5T230 341 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 MYH14Q7Z406 1995 aaKnown RBP7.13□□□□□ -1.27
VCAN-208ENST00000512590 SPINK6Q6UWN8 80 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 MUSTN1Q8IVN3 82 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 LYPD1Q8N2G4 141 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 C5orf66Q9H5L9 145 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 TRBV6-7A0A0A0MS04 114 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 C9JAW5 83 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 IFI6P09912 130 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 LOXP28300 417 aaPredicted RBP7.13□□□□□ -1.27
VCAN-208ENST00000512590 ZNF493Q6ZR52 646 aa7.13□□□□□ -1.27
VCAN-208ENST00000512590 BAALC-AS2P0C853 105 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
VCAN-208ENST00000512590 AMN1Q8IY45 258 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 ATG2BQ96BY7 2078 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 Q6Q795 121 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 SLC25A29Q8N8R3 303 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 TRPM6Q9BX84 2022 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 HSD52Q0P140 79 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 Q8N9W7 124 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 IGKV1-17P01599 117 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 MSRB3Q8IXL7 192 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 COX7B2Q8TF08 81 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 OSTCQ9NRP0 149 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 FAM110AQ9BQ89 295 aa7.12□□□□□ -1.27
VCAN-208ENST00000512590 RSPO3Q9BXY4 272 aaPredicted RBP7.12□□□□□ -1.27
VCAN-208ENST00000512590 PRRC2BQ5JSZ5 2229 aaKnown RBP7.12□□□□□ -1.27
VCAN-208ENST00000512590 SDHAF1A6NFY7 115 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 P0DMU3 169 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 FAM231AP0DMU4 169 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 FAM231CP0DMU5 169 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 PRR31Q5SQ13 230 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 HIST2H2BCQ6DN03 193 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 TM2D1Q9BX74 207 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 SMKR1H3BMG3 65 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 BVES-AS1Q5T3Y7 98 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 MORN5Q5VZ52 161 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 NAA38Q9BRA0 125 aaKnown RBP7.11□□□□□ -1.27
VCAN-208ENST00000512590 SMIM27A0A1W2PRY6 76 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 PLA2G1BP04054 148 aaKnown RBP7.11□□□□□ -1.27
VCAN-208ENST00000512590 FAM104BQ5XKR9 115 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 IGKV1D-37A0A075B6S9 117 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 TRBV5-7A0A0A0MS05 114 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 A0A1B0GVG6 124 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 AHCTF1Q8WYP5 2266 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 C1orf194Q5T5A4 169 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 HS3ST6Q96QI5 342 aa7.11□□□□□ -1.27
VCAN-208ENST00000512590 IGLL1P15814 213 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 INTS1Q8N201 2190 aaKnown RBP7.1□□□□□ -1.27
VCAN-208ENST00000512590 TRAV10A0A0B4J240 114 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 H3BQ85 93 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 SMIM10L1P0DMW3 83 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 SMIM10Q96HG1 83 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 UPK3BQ9BT76 320 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 ZNF319Q9P2F9 582 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 IGKV1-12A0A0C4DH73 117 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 SRSF2Q01130 221 aaKnown RBP7.1□□□□□ -1.27
VCAN-208ENST00000512590 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 PRR15LQ9BU68 103 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 NRAPQ86VF7 1730 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 CACNA1BQ00975 2339 aa7.1□□□□□ -1.27
VCAN-208ENST00000512590 LINC00322Q6ZN03 302 aaPredicted RBP7.1□□□□□ -1.27
VCAN-208ENST00000512590 DANCRP0C864 163 aa7.09□□□□□ -1.27
VCAN-208ENST00000512590 HRCT1Q6UXD1 115 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms