RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 ACY3Q96HD9 319 aa6.4□□□□□ -1.39
NUP54-211ENST00000512151 TXN2Q99757 166 aa6.4□□□□□ -1.39
NUP54-211ENST00000512151 CARHSP1Q9Y2V2 147 aaKnown RBP6.4□□□□□ -1.39
NUP54-211ENST00000512151 IGKV1-17P01599 117 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 APOC3P02656 99 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 IGLC1P0CG04 106 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 EMP1P54849 157 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 ETFRF1Q6IPR1 90 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 Q6ZRG5 221 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 Q6ZSN1 163 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 TCF24Q7RTU0 167 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 STX12Q86Y82 276 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 THAP8Q8NA92 274 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 SLC35E1Q96K37 410 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 ATP5SQ99766 215 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 MS4A6AQ9H2W1 248 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 NPVFQ9HCQ7 196 aa6.39□□□□□ -1.39
NUP54-211ENST00000512151 FAT3Q8TDW7 4589 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 UMAD1C9J7I0 102 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 FNDC10F2Z333 226 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 GNG7O60262 68 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 DFFBO76075 338 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 CD5P06127 495 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 SPART-AS1P0CW21 52 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 GATA2P23769 480 aaPredicted RBP6.38□□□□□ -1.39
NUP54-211ENST00000512151 OR10J1P30954 320 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 NPBWR1P48145 328 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 SRSF3P84103 164 aaKnown RBP6.38□□□□□ -1.39
NUP54-211ENST00000512151 ZNF90Q03938 601 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 CLINT1Q14677 625 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 ATP6V1FQ16864 119 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 TMEM144Q7Z5S9 345 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 GNPNAT1Q96EK6 184 aaPredicted RBP6.38□□□□□ -1.39
NUP54-211ENST00000512151 ATP6V0BQ99437 205 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 ATG101Q9BSB4 218 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 GGACTQ9BVM4 153 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 SEC11CQ9BY50 192 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 SMDT1Q9H4I9 107 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 UQCC1Q9NVA1 299 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 WDR83OSQ9Y284 106 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 RFNGQ9Y644 331 aa6.38□□□□□ -1.39
NUP54-211ENST00000512151 TRAV30A0A087WSZ9 112 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 UBE2L5PA0A1B0GUS4 154 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 SMCO3A2RU48 225 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 NUPL2O15504 423 aaKnown RBP6.37□□□□□ -1.39
NUP54-211ENST00000512151 APOHP02749 345 aaPredicted RBP6.37□□□□□ -1.39
NUP54-211ENST00000512151 ADCYAP1P18509 176 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 ATP6V0CP27449 155 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 CAMLGP49069 296 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 HBG1P69891 147 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 HBG2P69892 147 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 AKR1C1Q04828 323 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 SVBPQ8N300 66 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 HSD17B11Q8NBQ5 300 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 NARS2Q96I59 477 aaKnown RBP6.37□□□□□ -1.39
NUP54-211ENST00000512151 MGST2Q99735 147 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 TMEM147Q9BVK8 224 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 PARD6GQ9BYG4 376 aaPredicted RBP6.37□□□□□ -1.39
NUP54-211ENST00000512151 SH3BGRL3Q9H299 93 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 TREM1Q9NP99 234 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 DKK2Q9UBU2 259 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 LINC00588Q9Y4M8 146 aa6.37□□□□□ -1.39
NUP54-211ENST00000512151 ZFP92A6NM28 416 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 F8W036 122 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 FAM229AH3BQW9 127 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 AGPAT2O15120 278 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 LINC00869P0C866 280 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 PSG1P11464 419 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 YPEL3P61236 119 aaPredicted RBP6.36□□□□□ -1.39
NUP54-211ENST00000512151 BTN1A1Q13410 526 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 FAM222AQ5U5X8 452 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 SPSB3Q6PJ21 355 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 TEPPQ6URK8 271 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 ATRAIDQ6UW56 229 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 TOMM20LQ6UXN7 152 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 DPPA3Q6W0C5 159 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 ZNF600Q6ZNG1 722 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 CYP2G1PQ6ZSU1 146 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 OR2G3Q8NGZ4 309 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 TRGV9Q99603 122 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 NIPSNAP3BQ9BS92 247 aa6.36□□□□□ -1.39
NUP54-211ENST00000512151 NKX6-2Q9C056 277 aaPredicted RBP6.36□□□□□ -1.39
NUP54-211ENST00000512151 WDR61Q9GZS3 305 aaKnown RBP6.36□□□□□ -1.39
NUP54-211ENST00000512151 TMA7Q9Y2S6 64 aaKnown RBP6.36□□□□□ -1.39
NUP54-211ENST00000512151 IGHV3-66A0A0C4DH42 116 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 DNASE2O00115 360 aaPredicted RBP6.35□□□□□ -1.39
NUP54-211ENST00000512151 TOMM40O96008 361 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 IFNA5P01569 189 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 FGF7P21781 194 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 PAFAH1B2P68402 229 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 ICAM4Q14773 271 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 ACTL10Q5JWF8 245 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 TMEM231Q9H6L2 316 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 XCL2Q9UBD3 114 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 SLC45A2Q9UMX9 530 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 PUS1Q9Y606 427 aaKnown RBP eCLIP6.35□□□□□ -1.39
NUP54-211ENST00000512151 DNAH8Q96JB1 4490 aa6.35□□□□□ -1.39
NUP54-211ENST00000512151 TRAV2A0A0B4J234 112 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 SNAPINO95295 136 aa6.34□□□□□ -1.39
NUP54-211ENST00000512151 SFTA3P0C7M3 94 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms