RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 CSN1S1P47710 185 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 AWAT1Q58HT5 328 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 BLNKQ8WV28 456 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 DPF1Q92782 380 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 RHPN1-AS1Q9BWJ2 59 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 TUBA4BQ9H853 241 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 NRN1Q9NPD7 142 aa6.92□□□□□ -1.3
NR1I3-230ENST00000511944 NSD1Q96L73 2696 aaPredicted RBP6.92□□□□□ -1.3
NR1I3-230ENST00000511944 IGHV4OR15-8A0A075B7B6 117 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 A0A087WW49 117 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 ISLRO14498 428 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 CHEK1O14757 476 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 MT-ND4LP03901 98 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 GNG4P50150 75 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 CEBPGP53567 150 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 FOXL1Q12952 345 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 KLHL30-AS1Q8NEE0 82 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 OR1N2Q8NGR9 330 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 C16orf92Q96LL3 132 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 MLXQ9UH92 298 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 ZFP30Q9Y2G7 519 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 SMAD5-AS1Q9Y6J3 95 aa6.91□□□□□ -1.3
NR1I3-230ENST00000511944 FLNBO75369 2602 aaKnown RBP6.9□□□□□ -1.3
NR1I3-230ENST00000511944 HIVEP1P15822 2718 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 TRBV20OR9-2A0A075B6H5 130 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 C7orf77A4D0Y5 90 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 M0R036 132 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 SLC17A3O00476 420 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 LTAP01374 205 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 UBE2G1P62253 170 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 RPL23P62829 140 aaKnown RBP6.9□□□□□ -1.3
NR1I3-230ENST00000511944 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 COX8CQ7Z4L0 72 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 IGF2BP2-AS1Q96M15 143 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 OR5B12Q96R08 314 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 KRTAP9-9Q9BYP9 154 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 KRTAP9-4Q9BYQ2 154 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 SMCO4Q9NRQ5 59 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.3
NR1I3-230ENST00000511944 BAHCC1Q9P281 2608 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 C2orf70A6NJV1 201 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 DIRC3C9JPN6 131 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 SOCS3O14543 225 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 APOHP02749 345 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-230ENST00000511944 CBLN1P23435 193 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 PSG3Q16557 428 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 CENPWQ5EE01 88 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 FAM231DQ6ZW35 169 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 OR11H1Q8NG94 326 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 OR9G4Q8NGQ1 327 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 BTF3L4Q96K17 158 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 IMMP2LQ96T52 175 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 ZMAT4Q9H898 229 aa6.89□□□□□ -1.31
NR1I3-230ENST00000511944 MTORP42345 2549 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 CCL24O00175 119 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 GCGP01275 180 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 CD28P10747 220 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 ID1P41134 155 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 PAFAH1B2P68402 229 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 ADIRFQ15847 76 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 SAPCD1Q5SSQ6 148 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 GOLT1AQ6ZVE7 132 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 Q71RC1 249 aaPredicted RBP6.88□□□□□ -1.31
NR1I3-230ENST00000511944 Q86TA4 180 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 BAGE2Q86Y30 109 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 EXOC3-AS1Q8N2X6 119 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 OR2K2Q8NGT1 345 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 RAX2Q96IS3 184 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 C20orf173Q96LM9 149 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 CITED2Q99967 270 aaPredicted RBP6.88□□□□□ -1.31
NR1I3-230ENST00000511944 MLST8Q9BVC4 326 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 RPS10P5Q9NQ39 176 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 ZFHX3Q15911 3703 aa6.88□□□□□ -1.31
NR1I3-230ENST00000511944 TRAV9-1A0A075B6T8 112 aa6.87□□□□□ -1.31
NR1I3-230ENST00000511944 OVOL1O14753 267 aa6.87□□□□□ -1.31
NR1I3-230ENST00000511944 ZNF207O43670 478 aaKnown RBP6.87□□□□□ -1.31
NR1I3-230ENST00000511944 FOLR2P14207 255 aa6.87□□□□□ -1.31
NR1I3-230ENST00000511944 HOXA5P20719 270 aa6.87□□□□□ -1.31
NR1I3-230ENST00000511944 FLI1Q01543 452 aaPredicted RBP6.87□□□□□ -1.31
NR1I3-230ENST00000511944 CT83Q5H943 113 aa6.87□□□□□ -1.31
NR1I3-230ENST00000511944 ATRAIDQ6UW56 229 aa6.87□□□□□ -1.31
NR1I3-230ENST00000511944 TCF24Q7RTU0 167 aa6.87□□□□□ -1.31
NR1I3-230ENST00000511944 TMEM183AQ8IXX5 376 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms