RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 SPART-AS1P0CW21 52 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 EMP1P54849 157 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 ZNF767PQ75MW2 155 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 LINC00476Q8WZB0 136 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 PPP1R14DQ9NXH3 145 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
PDLIM5-216ENST00000511767 NBEAP1P0C6P0 100 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 RRN3P1Q2M238 152 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 PARD6GQ9BYG4 376 aaPredicted RBP11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 OR51M1Q9H341 326 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 KCNIP2Q9NS61 270 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 DKK2Q9UBU2 259 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 APLNQ9ULZ1 77 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 FUT9Q9Y231 359 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 VPS13DQ5THJ4 4388 aa11.53□□□□□ -0.56
PDLIM5-216ENST00000511767 TRAV10A0A0B4J240 114 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 ZNF705GA8MUZ8 300 aaPredicted RBP11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 IGLL5B9A064 214 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 LY6G6CO95867 125 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 AZU1P20160 251 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 TCTAP57738 103 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 PDE6HQ13956 83 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 KIR3DS1Q14943 382 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 OXA1LQ15070 435 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 BAP18Q8IXM2 172 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 RPP25LQ8N5L8 163 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 OR10J6PQ8NGY7 276 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 BLNKQ8WV28 456 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 RNF141Q8WVD5 230 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 LINC01587Q99440 93 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 TMEM208Q9BTX3 173 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 MRPL32Q9BYC8 188 aaKnown RBP11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 PRELID1Q9Y255 219 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 TIMM9Q9Y5J7 89 aa11.52□□□□□ -0.57
PDLIM5-216ENST00000511767 LOC102723971A0A1B0GUV8 181 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 M0R3E3 92 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 INSP01308 110 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 CDKN1BP46527 198 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 RGS21Q2M5E4 152 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 FFAR4Q5NUL3 377 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 FAM222AQ5U5X8 452 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 LGALS9CQ6DKI2 356 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 EXOC3-AS1Q8N2X6 119 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 FXYD5Q96DB9 178 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 ZNF503Q96F45 646 aa11.51□□□□□ -0.57
PDLIM5-216ENST00000511767 DEFB131BA0A096LNP1 70 aa11.5□□□□□ -0.57
PDLIM5-216ENST00000511767 NPIPB6E9PJ23 425 aa11.5□□□□□ -0.57
PDLIM5-216ENST00000511767 GIPP09681 153 aaPredicted RBP11.5□□□□□ -0.57
PDLIM5-216ENST00000511767 AQP10Q96PS8 301 aa11.5□□□□□ -0.57
PDLIM5-216ENST00000511767 PAXXQ9BUH6 204 aa11.5□□□□□ -0.57
PDLIM5-216ENST00000511767 AGPAT4-IT1Q9H0P7 198 aa11.5□□□□□ -0.57
PDLIM5-216ENST00000511767 YTHDF2Q9Y5A9 579 aaKnown RBP11.5□□□□□ -0.57
PDLIM5-216ENST00000511767 TSPOP30536 169 aa11.49□□□□□ -0.57
PDLIM5-216ENST00000511767 ICAM4Q14773 271 aa11.49□□□□□ -0.57
PDLIM5-216ENST00000511767 TMEM256Q8N2U0 113 aa11.49□□□□□ -0.57
PDLIM5-216ENST00000511767 ASB13Q8WXK3 278 aa11.49□□□□□ -0.57
PDLIM5-216ENST00000511767 LINC00477Q96M19 166 aa11.49□□□□□ -0.57
PDLIM5-216ENST00000511767 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
PDLIM5-216ENST00000511767 KMT2AQ03164 3969 aa11.49□□□□□ -0.57
PDLIM5-216ENST00000511767 OR10J4P0C629 311 aa11.48□□□□□ -0.57
PDLIM5-216ENST00000511767 TAS2R60P59551 318 aa11.48□□□□□ -0.57
PDLIM5-216ENST00000511767 ERCC8Q13216 396 aa11.48□□□□□ -0.57
PDLIM5-216ENST00000511767 ODF3Q96PU9 254 aa11.48□□□□□ -0.57
PDLIM5-216ENST00000511767 PLAC8L1A1L4L8 177 aa11.47□□□□□ -0.57
PDLIM5-216ENST00000511767 C9orf47Q6ZRZ4 202 aa11.47□□□□□ -0.57
PDLIM5-216ENST00000511767 FAM19A4Q96LR4 140 aa11.47□□□□□ -0.57
PDLIM5-216ENST00000511767 C20orf144Q9BQM9 153 aa11.47□□□□□ -0.57
PDLIM5-216ENST00000511767 AAMDCQ9H7C9 122 aa11.47□□□□□ -0.57
PDLIM5-216ENST00000511767 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 H7BYZ3 331 aa11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 EIF3GO75821 320 aaKnown RBP eCLIP11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 M6PRP20645 277 aa11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 RANP62826 216 aaKnown RBP11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 ACOT6Q3I5F7 207 aaPredicted RBP11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 GFI1BQ5VTD9 330 aa11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 LYPD1Q8N2G4 141 aa11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 VGLL1Q99990 258 aa11.46□□□□□ -0.57
PDLIM5-216ENST00000511767 OR7C2O60412 319 aa11.45□□□□□ -0.58
PDLIM5-216ENST00000511767 HTN1P15515 57 aa11.45□□□□□ -0.58
PDLIM5-216ENST00000511767 LEPP41159 167 aa11.45□□□□□ -0.58
PDLIM5-216ENST00000511767 ZNF493Q6ZR52 646 aa11.45□□□□□ -0.58
PDLIM5-216ENST00000511767 OR2T35Q8NGX2 323 aa11.45□□□□□ -0.58
PDLIM5-216ENST00000511767 PHYHIPLQ96FC7 376 aa11.45□□□□□ -0.58
PDLIM5-216ENST00000511767 TRAV12-3A0A0B4J271 114 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 LYRM9A8MSI8 78 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 G3V3Q6 166 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 ZNF324O75467 553 aaPredicted RBP11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 TAS2R45P59539 299 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 ZNF266Q14584 549 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 FAM122CQ6P4D5 195 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 OR10G4Q8NGN3 311 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 OR10G9Q8NGN4 311 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 OR10G7Q8NGN6 311 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 TNFSF18Q9UNG2 199 aa11.44□□□□□ -0.58
PDLIM5-216ENST00000511767 A0A1W2PPV4 95 aa11.43□□□□□ -0.58
PDLIM5-216ENST00000511767 RNF222A6NCQ9 220 aa11.43□□□□□ -0.58
PDLIM5-216ENST00000511767 KLLNB2CW77 178 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms