RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 RAB31Q13636 194 aa10.75□□□□□ -0.69
COL1A1-213ENST00000511732 C15orf53Q8NAA6 179 aa10.75□□□□□ -0.69
COL1A1-213ENST00000511732 RNASE8Q8TDE3 154 aaKnown RBP10.75□□□□□ -0.69
COL1A1-213ENST00000511732 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
COL1A1-213ENST00000511732 ZNF586Q9NXT0 402 aa10.75□□□□□ -0.69
COL1A1-213ENST00000511732 F5H768 121 aa10.74□□□□□ -0.69
COL1A1-213ENST00000511732 PVALBP20472 110 aaPredicted RBP10.74□□□□□ -0.69
COL1A1-213ENST00000511732 S100A11P31949 105 aa10.74□□□□□ -0.69
COL1A1-213ENST00000511732 RPL29P47914 159 aaKnown RBP10.74□□□□□ -0.69
COL1A1-213ENST00000511732 GFI1BQ5VTD9 330 aa10.74□□□□□ -0.69
COL1A1-213ENST00000511732 OR1L4Q8NGR5 311 aa10.74□□□□□ -0.69
COL1A1-213ENST00000511732 SLC39A9Q9NUM3 307 aa10.74□□□□□ -0.69
COL1A1-213ENST00000511732 PXMP4Q9Y6I8 212 aa10.74□□□□□ -0.69
COL1A1-213ENST00000511732 CBY3A6NI87 242 aa10.73□□□□□ -0.69
COL1A1-213ENST00000511732 H7BYZ3 331 aa10.73□□□□□ -0.69
COL1A1-213ENST00000511732 CT45A10P0DMU9 189 aa10.73□□□□□ -0.69
COL1A1-213ENST00000511732 BAXQ07812 192 aa10.73□□□□□ -0.69
COL1A1-213ENST00000511732 OR10J6PQ8NGY7 276 aa10.73□□□□□ -0.69
COL1A1-213ENST00000511732 TMEM263Q8WUH6 116 aaKnown RBP10.73□□□□□ -0.69
COL1A1-213ENST00000511732 NOP10Q9NPE3 64 aaKnown RBP10.73□□□□□ -0.69
COL1A1-213ENST00000511732 TIMM8BQ9Y5J9 83 aaPredicted RBP10.73□□□□□ -0.69
COL1A1-213ENST00000511732 PKHD1P08F94 4074 aa10.73□□□□□ -0.69
COL1A1-213ENST00000511732 J3KRW8 73 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 ATP5G1P05496 136 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 FGF7P21781 194 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 ATP5G3P48201 142 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 ASAH1Q13510 395 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 LINC00299Q6ZSB3 139 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 CHAC2Q8WUX2 184 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 PFDN5Q99471 154 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 C20orf144Q9BQM9 153 aa10.72□□□□□ -0.69
COL1A1-213ENST00000511732 NPIPB6E9PJ23 425 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 M0R3E3 92 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 NDUFB4O95168 129 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 SIX6O95475 246 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 NHLH2Q02577 135 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 GUK1Q16774 197 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 GCSAMLQ5JQS6 135 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 MZT2BQ6NZ67 158 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 STX12Q86Y82 276 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 LINC00612Q8N6U2 182 aa10.71□□□□□ -0.69
COL1A1-213ENST00000511732 GPN1Q9HCN4 374 aaPredicted RBP10.71□□□□□ -0.69
COL1A1-213ENST00000511732 TRBV19A0A075B6N1 114 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 ZNF253O75346 499 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 NUDT3O95989 172 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 PYYP10082 97 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 HBG1P69891 147 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 HBG2P69892 147 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 IFITM3Q01628 133 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 ATP6V1FQ16864 119 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 RNF141Q8WVD5 230 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 ODF3Q96PU9 254 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 NPCDR1Q9BY65 106 aa10.7□□□□□ -0.7
COL1A1-213ENST00000511732 TRAV12-3A0A0B4J271 114 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 H0YIZ8 118 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 ERCC8Q13216 396 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 S100ZQ8WXG8 99 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 ATG101Q9BSB4 218 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 OR5AC2Q9NZP5 309 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 TMEM14CQ9P0S9 112 aa10.69□□□□□ -0.7
COL1A1-213ENST00000511732 HIST1H1EP10412 219 aaKnown RBP10.68□□□□□ -0.7
COL1A1-213ENST00000511732 LEPP41159 167 aa10.68□□□□□ -0.7
COL1A1-213ENST00000511732 FAM3BP58499 235 aaPredicted RBP10.68□□□□□ -0.7
COL1A1-213ENST00000511732 C1orf134Q5TEV5 83 aa10.68□□□□□ -0.7
COL1A1-213ENST00000511732 EXOC3-AS1Q8N2X6 119 aa10.68□□□□□ -0.7
COL1A1-213ENST00000511732 OR5C1Q8NGR4 320 aa10.68□□□□□ -0.7
COL1A1-213ENST00000511732 MRPL53Q96EL3 112 aaKnown RBP10.68□□□□□ -0.7
COL1A1-213ENST00000511732 SLC25A2Q9BXI2 301 aa10.68□□□□□ -0.7
COL1A1-213ENST00000511732 LINC00588Q9Y4M8 146 aa10.68□□□□□ -0.7
COL1A1-213ENST00000511732 UPK1BO75841 260 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 HOXA5P20719 270 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 LRRC37A5PQ49AS3 106 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 CCDC28AQ8IWP9 274 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 THAP6Q8TBB0 222 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 ENKURQ8TC29 256 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 BLNKQ8WV28 456 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 FAM167A-AS1Q96KT0 104 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 FAM19A4Q96LR4 140 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 AGPAT4-IT1Q9H0P7 198 aa10.67□□□□□ -0.7
COL1A1-213ENST00000511732 GAGE12BA1L429 117 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 MPDU1O75352 247 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 GAGE7O76087 117 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 GAGE12FP0CL80 117 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 GAGE12GP0CL81 117 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 GAGE12IP0CL82 117 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 CD300CQ08708 224 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 OR5I1Q13606 314 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 MIR17HGQ75NE6 70 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 PYGO2Q9BRQ0 406 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 NMES1Q9C002 83 aa10.66□□□□□ -0.7
COL1A1-213ENST00000511732 TRAV26-1A0A087WT03 109 aa10.65□□□□□ -0.7
COL1A1-213ENST00000511732 NBDYA0A0U1RRE5 68 aa10.65□□□□□ -0.7
COL1A1-213ENST00000511732 SNURFLB1AK76 121 aa10.65□□□□□ -0.7
COL1A1-213ENST00000511732 KLLNB2CW77 178 aa10.65□□□□□ -0.7
COL1A1-213ENST00000511732 E5RGE8 158 aa10.65□□□□□ -0.7
COL1A1-213ENST00000511732 ZNF324O75467 553 aaPredicted RBP10.65□□□□□ -0.7
COL1A1-213ENST00000511732 SLC25A5P05141 298 aaKnown RBP10.65□□□□□ -0.7
COL1A1-213ENST00000511732 MED14OSP0DP75 135 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms