RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 PGPEP1LA6NFU8 196 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 IGLV2-11P01706 119 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 SYNJ2BPP57105 145 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 KHDC1LQ5JSQ8 128 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 LCN12Q6JVE5 192 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 KCNIP4Q6PIL6 250 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 OR11H1Q8NG94 326 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 LINC00479Q96M42 142 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 YPEL4Q96NS1 127 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 ACANP16112 2415 aa11.56□□□□□ -0.56
SCLT1-209ENST00000511426 TRAV9-1A0A075B6T8 112 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 IGHV3OR16-13A0A075B7E8 117 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 IGHV3-49A0A0A0MS15 119 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 IGHV3-74A0A0B4J1X5 117 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 TRAV34A0A0B4J273 112 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 COLCA2A8K830 154 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 M0R3E3 92 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 ERVFC1-1P60608 527 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 FOXL1Q12952 345 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 FHL3Q13643 280 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 SAPCD1Q5SSQ6 148 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 COX8CQ7Z4L0 72 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 C16orf92Q96LL3 132 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 ZNF492Q9P255 531 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 SONP18583 2426 aaKnown RBP11.55□□□□□ -0.56
SCLT1-209ENST00000511426 NOTCH2Q04721 2471 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 TRBV24-1A0A075B6N3 115 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 C2orf70A6NJV1 201 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 SOCS3O14543 225 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 ELOBQ15370 118 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 PPP1R14DQ9NXH3 145 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 PSG8Q9UQ74 426 aa11.55□□□□□ -0.56
SCLT1-209ENST00000511426 MGST1P10620 155 aaKnown RBP11.54□□□□□ -0.56
SCLT1-209ENST00000511426 CBLN1P23435 193 aa11.54□□□□□ -0.56
SCLT1-209ENST00000511426 ID1P41134 155 aa11.54□□□□□ -0.56
SCLT1-209ENST00000511426 IBA57Q5T440 356 aaKnown RBP11.54□□□□□ -0.56
SCLT1-209ENST00000511426 Q71RC1 249 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-209ENST00000511426 TCF24Q7RTU0 167 aa11.54□□□□□ -0.56
SCLT1-209ENST00000511426 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.54□□□□□ -0.56
SCLT1-209ENST00000511426 ANK3Q12955 4377 aaKnown RBP11.54□□□□□ -0.56
SCLT1-209ENST00000511426 TRAV8-2A0A0B4J237 113 aa11.53□□□□□ -0.56
SCLT1-209ENST00000511426 FAM24BQ8N5W8 94 aa11.53□□□□□ -0.56
SCLT1-209ENST00000511426 OR9G4Q8NGQ1 327 aa11.53□□□□□ -0.56
SCLT1-209ENST00000511426 NDFIP1Q9BT67 221 aa11.53□□□□□ -0.56
SCLT1-209ENST00000511426 LENEPQ9Y5L5 61 aa11.53□□□□□ -0.56
SCLT1-209ENST00000511426 TRAV2A0A0B4J234 112 aa11.52□□□□□ -0.56
SCLT1-209ENST00000511426 PFN1P07737 140 aaKnown RBP11.52□□□□□ -0.56
SCLT1-209ENST00000511426 CD28P10747 220 aa11.52□□□□□ -0.56
SCLT1-209ENST00000511426 FOLR2P14207 255 aa11.52□□□□□ -0.56
SCLT1-209ENST00000511426 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.56
SCLT1-209ENST00000511426 CT83Q5H943 113 aa11.52□□□□□ -0.56
SCLT1-209ENST00000511426 PYGO2Q9BRQ0 406 aa11.52□□□□□ -0.56
SCLT1-209ENST00000511426 AURKAIP1Q9NWT8 199 aaPredicted RBP11.52□□□□□ -0.56
SCLT1-209ENST00000511426 SIGLEC8Q9NYZ4 499 aa11.52□□□□□ -0.56
SCLT1-209ENST00000511426 OVOL1O14753 267 aa11.52□□□□□ -0.57
SCLT1-209ENST00000511426 RPL11P62913 178 aaKnown RBP11.52□□□□□ -0.57
SCLT1-209ENST00000511426 PAFAH1B2P68402 229 aa11.52□□□□□ -0.57
SCLT1-209ENST00000511426 PRNTQ86SH4 94 aa11.52□□□□□ -0.57
SCLT1-209ENST00000511426 OR4B1Q8NGF8 309 aa11.52□□□□□ -0.57
SCLT1-209ENST00000511426 CITED2Q99967 270 aaPredicted RBP11.52□□□□□ -0.57
SCLT1-209ENST00000511426 IL36BQ9NZH7 164 aa11.52□□□□□ -0.57
SCLT1-209ENST00000511426 V9GYV3 84 aa11.52□□□□□ -0.57
SCLT1-209ENST00000511426 TRAV8-1A0A0A6YYK1 113 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 CCL24O00175 119 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 CT45A10P0DMU9 189 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 SLURP1P55000 103 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 OR5I1Q13606 314 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 C9orf47Q6ZRZ4 202 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 C18orf65Q6ZTR6 163 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 NDUFA11Q86Y39 141 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
SCLT1-209ENST00000511426 TRBV7-9A0A0J9YWB2 115 aa11.5□□□□□ -0.57
SCLT1-209ENST00000511426 RAB5AP20339 215 aa11.5□□□□□ -0.57
SCLT1-209ENST00000511426 DEFB136Q30KP8 78 aa11.5□□□□□ -0.57
SCLT1-209ENST00000511426 GBGT1Q8N5D6 347 aa11.5□□□□□ -0.57
SCLT1-209ENST00000511426 DAZAP1Q96EP5 407 aaKnown RBP11.5□□□□□ -0.57
SCLT1-209ENST00000511426 IGKV2-40A0A087WW87 121 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-209ENST00000511426 C19orf71A6NCJ1 209 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 NPIPB6E9PJ23 425 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 HAX1O00165 279 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 IGKV2D-40P01614 121 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-209ENST00000511426 TMEM78Q5T7P6 136 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 ZNF738Q8NE65 137 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 RAX2Q96IS3 184 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 LINC00477Q96M19 166 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 PRR25Q96S07 402 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 URGCP-MRPS24S4R325 110 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 FAM231BA6NCW3 169 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 ZNF705GA8MUZ8 300 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-209ENST00000511426 GATCO43716 136 aaKnown RBP11.49□□□□□ -0.57
SCLT1-209ENST00000511426 TYMSP04818 313 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 HLA-DMBP28068 263 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 SNRPD3P62318 126 aaKnown RBP11.49□□□□□ -0.57
SCLT1-209ENST00000511426 RNF182Q8N6D2 247 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 NHLRC2Q8NBF2 726 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 NUDT10Q8NFP7 164 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 DLX4Q92988 240 aaPredicted RBP11.49□□□□□ -0.57
SCLT1-209ENST00000511426 NUDT11Q96G61 164 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 FAM210BQ96KR6 192 aa11.49□□□□□ -0.57
SCLT1-209ENST00000511426 SGK494Q96LW2 274 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms