RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 RNF183Q96D59 192 aa9.43□□□□□ -0.9
COL6A6-203ENST00000511332 ZNF503Q96F45 646 aa9.43□□□□□ -0.9
COL6A6-203ENST00000511332 CTXND1A0A1B0GTU2 59 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 A8MTW9 85 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 IGKV3-20P01619 116 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 SEC11BP0C7V7 166 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 STAG3L2P0CL84 134 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 STAG3L3P0CL85 134 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 CNN1P51911 297 aaKnown RBP9.42□□□□□ -0.9
COL6A6-203ENST00000511332 HIST1H1AQ02539 215 aaPredicted RBP9.42□□□□□ -0.9
COL6A6-203ENST00000511332 BAP18Q8IXM2 172 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 LYPD1Q8N2G4 141 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 OR10J6PQ8NGY7 276 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 PHYHIPLQ96FC7 376 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
COL6A6-203ENST00000511332 UMAD1C9J7I0 102 aa9.41□□□□□ -0.9
COL6A6-203ENST00000511332 HMGB3O15347 200 aaKnown RBP9.41□□□□□ -0.9
COL6A6-203ENST00000511332 CXorf1O96002 111 aa9.41□□□□□ -0.9
COL6A6-203ENST00000511332 CD300CQ08708 224 aa9.41□□□□□ -0.9
COL6A6-203ENST00000511332 LGALSLQ3ZCW2 172 aaPredicted RBP9.41□□□□□ -0.9
COL6A6-203ENST00000511332 EIF5AL1Q6IS14 154 aaKnown RBP9.41□□□□□ -0.9
COL6A6-203ENST00000511332 EXOC3-AS1Q8N2X6 119 aa9.41□□□□□ -0.9
COL6A6-203ENST00000511332 PPP1R14DQ9NXH3 145 aa9.41□□□□□ -0.9
COL6A6-203ENST00000511332 BOLA1Q9Y3E2 137 aa9.41□□□□□ -0.9
COL6A6-203ENST00000511332 TENM3Q9P273 2699 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 ZNF705FA8MVS1 300 aaPredicted RBP9.4□□□□□ -0.9
COL6A6-203ENST00000511332 EIF3GO75821 320 aaKnown RBP eCLIP9.4□□□□□ -0.9
COL6A6-203ENST00000511332 AMBPP02760 352 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 CSN1S1P47710 185 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 ICAM4Q14773 271 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 FAM74A1Q5RGS3 127 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 C9orf62Q8N4C0 152 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 Q9H3A6 140 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 TMEM167BQ9NRX6 74 aa9.4□□□□□ -0.9
COL6A6-203ENST00000511332 BOLA2-SMG1P6H3BVE0 249 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 M0R3E3 92 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 GIG44P09565 113 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-203ENST00000511332 ZNF705DP0CH99 300 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-203ENST00000511332 ZNF705BP0CI00 300 aaPredicted RBP9.39□□□□□ -0.91
COL6A6-203ENST00000511332 GCHFRP30047 84 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 RANP62826 216 aaKnown RBP9.39□□□□□ -0.91
COL6A6-203ENST00000511332 AMTNQ6UX39 209 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 DPPA3Q6W0C5 159 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 SLC35B3Q9H1N7 401 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 XCL2Q9UBD3 114 aa9.39□□□□□ -0.91
COL6A6-203ENST00000511332 MAP1LC3B2A6NCE7 125 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 NPIPB6E9PJ23 425 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 INSP01308 110 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 FXYD7P58549 80 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 ZNF726P1Q15940 193 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 SSX7Q7RTT5 188 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 IQCF2Q8IXL9 164 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 OR11H2Q8NH07 326 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 RXFP4Q8TDU9 374 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 TMED6Q8WW62 240 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 WWC2-AS2Q96NR7 200 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 ODF3Q96PU9 254 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 RARRES2Q99969 163 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 MAP1LC3BQ9GZQ8 125 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 DNAH9Q9NYC9 4486 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 NBEAL2Q6ZNJ1 2754 aa9.38□□□□□ -0.91
COL6A6-203ENST00000511332 PRAC2D3DTV9 90 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 TSPOP30536 169 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 SPINK13Q1W4C9 94 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 CSNK1G2-AS1Q8NCQ2 148 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 CMTM2Q8TAZ6 248 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 FAM213BQ8TBF2 198 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 SUN5Q8TC36 379 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 GOLT1BQ9Y3E0 138 aa9.37□□□□□ -0.91
COL6A6-203ENST00000511332 STAB2Q8WWQ8 2551 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 RBAKDNA6NC62 111 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 ZNF705EA8MWA4 302 aaPredicted RBP9.36□□□□□ -0.91
COL6A6-203ENST00000511332 M0R2Z0 102 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 LEPP41159 167 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 CDKN1BP46527 198 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 RAB5CP51148 216 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 TMEM78Q5T7P6 136 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 IGF2BP2-AS1Q96M15 143 aa9.36□□□□□ -0.91
COL6A6-203ENST00000511332 IGKV2-40A0A087WW87 121 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-203ENST00000511332 IGKV2D-40P01614 121 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-203ENST00000511332 SLC25A5P05141 298 aaKnown RBP9.35□□□□□ -0.91
COL6A6-203ENST00000511332 PRB4P10163 310 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-203ENST00000511332 MIFP14174 115 aa9.35□□□□□ -0.91
COL6A6-203ENST00000511332 FHITP49789 147 aa9.35□□□□□ -0.91
COL6A6-203ENST00000511332 FGF8P55075 233 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-203ENST00000511332 ZNF705AQ6ZN79 300 aaPredicted RBP9.35□□□□□ -0.91
COL6A6-203ENST00000511332 C9orf47Q6ZRZ4 202 aa9.35□□□□□ -0.91
COL6A6-203ENST00000511332 C5orf17Q8NAS9 161 aa9.35□□□□□ -0.91
COL6A6-203ENST00000511332 LINC00477Q96M19 166 aa9.35□□□□□ -0.91
COL6A6-203ENST00000511332 C11orf68Q9H3H3 251 aaKnown RBP9.35□□□□□ -0.91
COL6A6-203ENST00000511332 EDA2RQ9HAV5 297 aa9.35□□□□□ -0.91
COL6A6-203ENST00000511332 SERTM2A0A1B0GWG4 89 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 A0A1W2PRE2 83 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 PGPA6NDG6 321 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 DIRC3C9JPN6 131 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 TMEM208Q9BTX3 173 aa9.34□□□□□ -0.91
COL6A6-203ENST00000511332 KRTAP3-3Q9BYR6 98 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms