RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 DYNLT3P51808 116 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 EBI3Q14213 229 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 LGALS9BQ3B8N2 356 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 LGALS9CQ6DKI2 356 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 OR5AS1Q8N127 324 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 SLC25A45Q8N413 288 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM105Q8N8V8 129 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 WDR31Q8NA23 367 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 LINC01555Q8NAE3 123 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 LRRC29Q8WV35 223 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 TSACCQ96A04 125 aaPredicted RBP3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 ZC2HC1AQ96GY0 325 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 C18orf12Q96KH6 178 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 FAM173AQ9BQD7 235 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 TMEM59Q9BXS4 323 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 C11orf1Q9H5F2 150 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 VSIRQ9H7M9 311 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 OSTCQ9NRP0 149 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 WDR83OSQ9Y284 106 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 PYGO1Q9Y3Y4 419 aa3.59□□□□□ -1.83
HMGB3P13-201ENST00000511263 KIAA1671Q9BY89 1806 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 MKI67P46013 3256 aaKnown RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRAV12-2A0A075B6T6 113 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 A0A0J9YW62 118 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 IZUMO1RA6ND01 250 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 OOSP1A8MZH6 123 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 LY6LH3BQJ8 138 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 H3BTX0 84 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 CCL24O00175 119 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 CST7O76096 145 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 GYPBP06028 91 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 IFI6P09912 130 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 GATA1P15976 413 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGFBP3P17936 291 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 CXCL5P42830 114 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 FOXA3P55318 350 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 B3GALT5-AS1P59052 145 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 NPC2P61916 151 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 UBE2L3P68036 154 aaKnown RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 LOXL1Q08397 574 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 C14orf177Q52M58 125 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZNF843Q8N446 348 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 DRAM1Q8N682 238 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 MDS2Q8NDY4 140 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 FAM57AQ8TBR7 257 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 ZPLD1Q8TCW7 415 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 KLK6Q92876 244 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 LINC01600Q96MT4 127 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 NMNAT3Q96T66 252 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 HDHD3Q9BSH5 251 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 CHAC1Q9BUX1 264 aa3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 NHP2Q9NX24 153 aaKnown RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 NUP210Q8TEM1 1887 aaPredicted RBP3.58□□□□□ -1.84
HMGB3P13-201ENST00000511263 SMIM26A0A096LP01 95 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRAV8-1A0A0A6YYK1 113 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 TCRBV4S1A1TA0A5B7 111 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 RBAKDNA6NC62 111 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 CPSF4LA6NMK7 179 aaKnown RBP3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 C17orf51A8MQB3 221 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 H7C423 109 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 CXCL13O43927 109 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 PPYP01298 95 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 IGKCP01834 107 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 MGST1P10620 155 aaKnown RBP3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 GCHFRP30047 84 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 MRPS36P82909 103 aaKnown RBP3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 SRYQ05066 204 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 ARFRP1Q13795 201 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 C12orf74Q32Q52 190 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 FAM201AQ5SY85 155 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 TMEM170BQ5T4T1 132 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 FAM219BQ5XKK7 198 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 Q6ZSR3 168 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 SLC25A48Q6ZT89 311 aaKnown RBP3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 HMGN2P46Q86SG4 172 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 GTSCR1Q86UQ5 136 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 PDPNQ86YL7 162 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 VKORC1L1Q8N0U8 176 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 SLC22A24Q8N4F4 322 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 IL1F10Q8WWZ1 152 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 C4orf45Q96LM5 186 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 GFRA4Q9GZZ7 299 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 AGPAT4-IT1Q9H0P7 198 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRIOBPQ9H2D6 2365 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 SERP1Q9Y6X1 66 aa3.57□□□□□ -1.84
HMGB3P13-201ENST00000511263 DOCK8Q8NF50 2099 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 TRAV26-2A0A0B4J265 109 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 SMIM27A0A1W2PRY6 76 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 TMEM150CB9EJG8 249 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 LYZL6O75951 148 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 NDUFB2O95178 105 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 CD7P09564 240 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 ASAH2BP0C7U1 165 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 COX6A1P12074 109 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 SSR2P43308 183 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 EMDP50402 254 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 FXYD2P54710 66 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 CLDN17P56750 224 aa3.56□□□□□ -1.84
HMGB3P13-201ENST00000511263 OR1C1Q15619 314 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms