RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PAFAH1B2P68402 229 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 SLC51BQ86UW2 128 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 ZNF738Q8NE65 137 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 DCANP1Q8TF63 244 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 GNPNAT1Q96EK6 184 aaPredicted RBP4.02□□□□□ -1.77
PROM1-211ENST00000511153 PHYHIPLQ96FC7 376 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 SGK494Q96LW2 274 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 ACTR3CQ9C0K3 210 aaPredicted RBP4.02□□□□□ -1.77
PROM1-211ENST00000511153 OR51M1Q9H341 326 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 TUBA4BQ9H853 241 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 NRN1Q9NPD7 142 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 KCNIP2Q9NS61 270 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 SIGLEC8Q9NYZ4 499 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 TIMM9Q9Y5J7 89 aa4.02□□□□□ -1.77
PROM1-211ENST00000511153 HUWE1Q7Z6Z7 4374 aaKnown RBP4.01□□□□□ -1.77
PROM1-211ENST00000511153 MAP1LC3B2A6NCE7 125 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 RBMY1BA6NDE4 496 aaKnown RBP4.01□□□□□ -1.77
PROM1-211ENST00000511153 RBMY1EA6NEQ0 496 aaKnown RBP4.01□□□□□ -1.77
PROM1-211ENST00000511153 OR4C46A6NHA9 309 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 RBMY1DP0C7P1 496 aaKnown RBP4.01□□□□□ -1.77
PROM1-211ENST00000511153 IGLC2P0DOY2 106 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 IGHV4-30-4P0DP06 118 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 RPL7P18124 248 aaKnown RBP4.01□□□□□ -1.77
PROM1-211ENST00000511153 GCHFRP30047 84 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 GNG5P63218 68 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 CCL20P78556 96 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 EGFEM1PQ0D2K5 195 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 ERCC8Q13216 396 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 ICAM4Q14773 271 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 C1orf194Q5T5A4 169 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 BPIFA4PQ86YQ2 179 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 NUDT10Q8NFP7 164 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 OR4B1Q8NGF8 309 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 SFT2D1Q8WV19 159 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 FXYD5Q96DB9 178 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 NUDT11Q96G61 164 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 SPAG8Q99932 426 aaPredicted RBP4.01□□□□□ -1.77
PROM1-211ENST00000511153 FAM110AQ9BQ89 295 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 PSMG3Q9BT73 122 aaPredicted RBP4.01□□□□□ -1.77
PROM1-211ENST00000511153 GPR61Q9BZJ8 451 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 MAP1LC3BQ9GZQ8 125 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 CLEC5AQ9NY25 188 aa4.01□□□□□ -1.77
PROM1-211ENST00000511153 IGKV2-40A0A087WW87 121 aaPredicted RBP4□□□□□ -1.77
PROM1-211ENST00000511153 TRAV25A0A0B4J276 109 aa4□□□□□ -1.77
PROM1-211ENST00000511153 ZNF705EA8MWA4 302 aaPredicted RBP4□□□□□ -1.77
PROM1-211ENST00000511153 SOCS3O14543 225 aa4□□□□□ -1.77
PROM1-211ENST00000511153 NDUFB4O95168 129 aa4□□□□□ -1.77
PROM1-211ENST00000511153 IGKV2D-40P01614 121 aaPredicted RBP4□□□□□ -1.77
PROM1-211ENST00000511153 NBEAP1P0C6P0 100 aa4□□□□□ -1.77
PROM1-211ENST00000511153 FRMD6-AS1P0C7T7 363 aa4□□□□□ -1.77
PROM1-211ENST00000511153 TAS2R45P59539 299 aa4□□□□□ -1.77
PROM1-211ENST00000511153 SERF2P84101 59 aa4□□□□□ -1.77
PROM1-211ENST00000511153 HIST1H1AQ02539 215 aaPredicted RBP4□□□□□ -1.77
PROM1-211ENST00000511153 KHDC3LQ587J8 217 aa4□□□□□ -1.77
PROM1-211ENST00000511153 PXDC1Q5TGL8 231 aa4□□□□□ -1.77
PROM1-211ENST00000511153 SYT8Q8NBV8 401 aa4□□□□□ -1.77
PROM1-211ENST00000511153 STOML3Q8TAV4 291 aa4□□□□□ -1.77
PROM1-211ENST00000511153 MRPL32Q9BYC8 188 aaKnown RBP4□□□□□ -1.77
PROM1-211ENST00000511153 YTHDF2Q9Y5A9 579 aaKnown RBP4□□□□□ -1.77
PROM1-211ENST00000511153 TRBV19A0A075B6N1 114 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 IGHV3OR16-12A0A075B7B8 117 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 CTXND1A0A1B0GTU2 59 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 PGPA6NDG6 321 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 MBP02144 154 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 PRM2P04554 102 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 SEC11BP0C7V7 166 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 HIST1H1EP10412 219 aaKnown RBP3.99□□□□□ -1.77
PROM1-211ENST00000511153 ID1P41134 155 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 SNRPD3P62318 126 aaKnown RBP3.99□□□□□ -1.77
PROM1-211ENST00000511153 EIF5AP63241 154 aaKnown RBP3.99□□□□□ -1.77
PROM1-211ENST00000511153 HAGHQ16775 308 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 KPRPQ5T749 579 aaPredicted RBP3.99□□□□□ -1.77
PROM1-211ENST00000511153 CST9LP1Q5W188 147 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 OR2K2Q8NGT1 345 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 Q8TAT8 98 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 RPUSD4Q96CM3 377 aaKnown RBP3.99□□□□□ -1.77
PROM1-211ENST00000511153 SLC35B3Q9H1N7 401 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 Q9H3A6 140 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 HRH4Q9H3N8 390 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 ZNF331Q9NQX6 463 aaPredicted RBP3.99□□□□□ -1.77
PROM1-211ENST00000511153 GNG13Q9P2W3 67 aa3.99□□□□□ -1.77
PROM1-211ENST00000511153 TRAV12-2A0A075B6T6 113 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 A0A087X0K7 114 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 TRAV34A0A0B4J273 112 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 M0R2Z0 102 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 PAGE4O60829 102 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 CXorf1O96002 111 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 SLC25A5P05141 298 aaKnown RBP3.98□□□□□ -1.77
PROM1-211ENST00000511153 STAG3L2P0CL84 134 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 STAG3L3P0CL85 134 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 C4BPBP20851 252 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 S100A7P31151 101 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 ATP5G3P48201 142 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 PSMB3P49720 205 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 SULT1A2P50226 295 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 PSG3Q16557 428 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 S100A7AQ86SG5 101 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 SBSPONQ8IVN8 264 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 STHQ8IWL8 128 aa3.98□□□□□ -1.77
PROM1-211ENST00000511153 SAT2Q96F10 170 aaPredicted RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms