RNA–Protein interactions for RNA: ENST00000511097.6

CAST-235, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 1,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-235ENST00000511097 ZNF705BP0CI00 300 aaPredicted RBP12.35□□□□□ -0.43
CAST-235ENST00000511097 M6PRP20645 277 aa12.35□□□□□ -0.43
CAST-235ENST00000511097 CNN1P51911 297 aaKnown RBP12.35□□□□□ -0.43
CAST-235ENST00000511097 RAB2AP61019 212 aa12.35□□□□□ -0.43
CAST-235ENST00000511097 ACOT6Q3I5F7 207 aaPredicted RBP12.35□□□□□ -0.43
CAST-235ENST00000511097 TEX261Q6UWH6 196 aa12.35□□□□□ -0.43
CAST-235ENST00000511097 AMTNQ6UX39 209 aa12.35□□□□□ -0.43
CAST-235ENST00000511097 SLC35B3Q9H1N7 401 aa12.35□□□□□ -0.43
CAST-235ENST00000511097 TMEM14CQ9P0S9 112 aa12.35□□□□□ -0.43
CAST-235ENST00000511097 MBP02144 154 aa12.34□□□□□ -0.43
CAST-235ENST00000511097 AKR1C8PQ5T2L2 129 aa12.34□□□□□ -0.43
CAST-235ENST00000511097 IGFL4Q6B9Z1 124 aa12.34□□□□□ -0.43
CAST-235ENST00000511097 CEMP1Q6PRD7 247 aaPredicted RBP12.34□□□□□ -0.43
CAST-235ENST00000511097 OR10G4Q8NGN3 311 aa12.34□□□□□ -0.43
CAST-235ENST00000511097 OR10G9Q8NGN4 311 aa12.34□□□□□ -0.43
CAST-235ENST00000511097 OR10G7Q8NGN6 311 aa12.34□□□□□ -0.43
CAST-235ENST00000511097 SAT2Q96F10 170 aaPredicted RBP12.34□□□□□ -0.43
CAST-235ENST00000511097 CSMD3Q7Z407 3707 aa12.33□□□□□ -0.44
CAST-235ENST00000511097 UMAD1C9J7I0 102 aa12.33□□□□□ -0.44
CAST-235ENST00000511097 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
CAST-235ENST00000511097 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
CAST-235ENST00000511097 PMS2P11Q13670 270 aa12.33□□□□□ -0.44
CAST-235ENST00000511097 RBMY1FQ15415 496 aaKnown RBP12.33□□□□□ -0.44
CAST-235ENST00000511097 FAM74A1Q5RGS3 127 aa12.33□□□□□ -0.44
CAST-235ENST00000511097 ZNF680Q8NEM1 530 aa12.33□□□□□ -0.44
CAST-235ENST00000511097 OR8A1Q8NGG7 326 aa12.33□□□□□ -0.44
CAST-235ENST00000511097 TRAV5A0A0B4J249 113 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 H3BQ15 152 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 DEFB4AO15263 64 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 SULT1A2P50226 295 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 IFITM2Q01629 132 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 PDE6HQ13956 83 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 FAM122CQ6P4D5 195 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 RPP25LQ8N5L8 163 aaKnown RBP12.32□□□□□ -0.44
CAST-235ENST00000511097 RPUSD4Q96CM3 377 aaKnown RBP12.32□□□□□ -0.44
CAST-235ENST00000511097 MRPL32Q9BYC8 188 aaKnown RBP12.32□□□□□ -0.44
CAST-235ENST00000511097 KLK5Q9Y337 293 aaPredicted RBP12.32□□□□□ -0.44
CAST-235ENST00000511097 GOLT1BQ9Y3E0 138 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 STARD9Q9P2P6 4700 aa12.32□□□□□ -0.44
CAST-235ENST00000511097 HIST1H1EP10412 219 aaKnown RBP12.31□□□□□ -0.44
CAST-235ENST00000511097 HLA-DMBP28068 263 aa12.31□□□□□ -0.44
CAST-235ENST00000511097 FHITP49789 147 aa12.31□□□□□ -0.44
CAST-235ENST00000511097 PHLDA1Q8WV24 401 aaPredicted RBP12.31□□□□□ -0.44
CAST-235ENST00000511097 IGF2BP2-AS1Q96M15 143 aa12.31□□□□□ -0.44
CAST-235ENST00000511097 TRBV19A0A075B6N1 114 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 A0A1W2PPV4 95 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 TMEM189A5PLL7 270 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 SLC17A3O00476 420 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 IFNA7P01567 189 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 FXYD7P58549 80 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 RHOBP62745 196 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 HIST1H1AQ02539 215 aaPredicted RBP12.3□□□□□ -0.44
CAST-235ENST00000511097 MIR17HGQ75NE6 70 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 MRPL53Q96EL3 112 aaKnown RBP12.3□□□□□ -0.44
CAST-235ENST00000511097 ZNF586Q9NXT0 402 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 FUT9Q9Y231 359 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 C11orf94C9JXX5 98 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 EIF3GO75821 320 aaKnown RBP eCLIP12.3□□□□□ -0.44
CAST-235ENST00000511097 CDC34P49427 236 aaPredicted RBP12.3□□□□□ -0.44
CAST-235ENST00000511097 RAB5CP51148 216 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 NANOS2P60321 138 aaKnown RBP12.3□□□□□ -0.44
CAST-235ENST00000511097 ZNF726P1Q15940 193 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 SSX7Q7RTT5 188 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 FAM213BQ8TBF2 198 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 RNF141Q8WVD5 230 aa12.3□□□□□ -0.44
CAST-235ENST00000511097 ACTR3CQ9C0K3 210 aaPredicted RBP12.3□□□□□ -0.44
CAST-235ENST00000511097 INSP01308 110 aa12.29□□□□□ -0.44
CAST-235ENST00000511097 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
CAST-235ENST00000511097 SPINK13Q1W4C9 94 aa12.29□□□□□ -0.44
CAST-235ENST00000511097 DPPA3Q6W0C5 159 aa12.29□□□□□ -0.44
CAST-235ENST00000511097 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
CAST-235ENST00000511097 RAB24Q969Q5 203 aa12.29□□□□□ -0.44
CAST-235ENST00000511097 FAM167A-AS1Q96KT0 104 aa12.29□□□□□ -0.44
CAST-235ENST00000511097 IGHV3OR16-12A0A075B7B8 117 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 CTXND1A0A1B0GTU2 59 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 H3BTX0 84 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 CRXO43186 299 aaPredicted RBP12.28□□□□□ -0.44
CAST-235ENST00000511097 HBE1P02100 147 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 OR10J6PQ8NGY7 276 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 SLC25A2Q9BXI2 301 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 PPP1R14DQ9NXH3 145 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 PRELID1Q9Y255 219 aa12.28□□□□□ -0.44
CAST-235ENST00000511097 TEX48A0A1B0GUV7 120 aa12.27□□□□□ -0.45
CAST-235ENST00000511097 M0R2Z0 102 aa12.27□□□□□ -0.45
CAST-235ENST00000511097 HMGB3O15347 200 aaKnown RBP12.27□□□□□ -0.45
CAST-235ENST00000511097 CDKN1BP46527 198 aa12.27□□□□□ -0.45
CAST-235ENST00000511097 TCTAP57738 103 aa12.27□□□□□ -0.45
CAST-235ENST00000511097 OR51M1Q9H341 326 aa12.27□□□□□ -0.45
CAST-235ENST00000511097 NDUFB4O95168 129 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 STAG3L2P0CL84 134 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 PYYP10082 97 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 RRN3P1Q2M238 152 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 ZNF767PQ75MW2 155 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 TMEM256Q8N2U0 113 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 ODF3Q96PU9 254 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 TMEM208Q9BTX3 173 aa12.26□□□□□ -0.45
CAST-235ENST00000511097 H2AFB1P0C5Y9 115 aa12.25□□□□□ -0.45
CAST-235ENST00000511097 NBEAP1P0C6P0 100 aa12.25□□□□□ -0.45
CAST-235ENST00000511097 SPART-AS1P0CW21 52 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms