RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 OR51M1Q9H341 326 aa10.07□□□□□ -0.8
DDX41-212ENST00000511040 CELA1Q9UNI1 258 aa10.07□□□□□ -0.8
DDX41-212ENST00000511040 TENM2Q9NT68 2774 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 LCE6AA0A183 80 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 NUPR2A6NF83 97 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 SMLR1H3BR10 107 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 M0R3E3 92 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 CRXO43186 299 aaPredicted RBP10.06□□□□□ -0.8
DDX41-212ENST00000511040 OR7C2O60412 319 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 INSP01308 110 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 PRM2P04554 102 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 ZNF767PQ75MW2 155 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 HSD17B11Q8NBQ5 300 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 INO80EQ8NBZ0 244 aaPredicted RBP10.06□□□□□ -0.8
DDX41-212ENST00000511040 OR10J6PQ8NGY7 276 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 FXYD5Q96DB9 178 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 TMEM208Q9BTX3 173 aa10.06□□□□□ -0.8
DDX41-212ENST00000511040 RYR2Q92736 4967 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 G3V3Q6 166 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 ZNF253O75346 499 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 AMBPP02760 352 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 NBEAP1P0C6P0 100 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 RAB2AP61019 212 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 RNF141Q8WVD5 230 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 ZNF503Q96F45 646 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 NEU1Q99519 415 aa10.05□□□□□ -0.8
DDX41-212ENST00000511040 RNF222A6NCQ9 220 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 SMIM9A6NGZ8 99 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 ZNF705GA8MUZ8 300 aaPredicted RBP10.04□□□□□ -0.8
DDX41-212ENST00000511040 HBE1P02100 147 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 ERCC8Q13216 396 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 ZNF266Q14584 549 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 ICAM4Q14773 271 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 KIR3DS1Q14943 382 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 ACOT6Q3I5F7 207 aaPredicted RBP10.04□□□□□ -0.8
DDX41-212ENST00000511040 FAM122CQ6P4D5 195 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 RPP25LQ8N5L8 163 aaKnown RBP10.04□□□□□ -0.8
DDX41-212ENST00000511040 PHYHIPLQ96FC7 376 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 TNFSF18Q9UNG2 199 aa10.04□□□□□ -0.8
DDX41-212ENST00000511040 LOC102723971A0A1B0GUV8 181 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 J3KRW8 73 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 HMGB3O15347 200 aaKnown RBP10.03□□□□□ -0.8
DDX41-212ENST00000511040 CT45A10P0DMU9 189 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 M6PRP20645 277 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 ATP6V0CP27449 155 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 UBE2L3P68036 154 aaKnown RBP10.03□□□□□ -0.8
DDX41-212ENST00000511040 PDE6HQ13956 83 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 KHDC3LQ587J8 217 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 Q6ZTC4 211 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 MRPL53Q96EL3 112 aaKnown RBP10.03□□□□□ -0.8
DDX41-212ENST00000511040 ST6GAL2Q96JF0 529 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 KRTAP17-1Q9BYP8 105 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 SH3BGRL3Q9H299 93 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 AAMDCQ9H7C9 122 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 PRELID1Q9Y255 219 aa10.03□□□□□ -0.8
DDX41-212ENST00000511040 KLK5Q9Y337 293 aaPredicted RBP10.03□□□□□ -0.8
DDX41-212ENST00000511040 IGKV2-40A0A087WW87 121 aaPredicted RBP10.02□□□□□ -0.81
DDX41-212ENST00000511040 NPIPB6E9PJ23 425 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 ARPC5O15511 151 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 JTBO76095 146 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 IGKV2D-40P01614 121 aaPredicted RBP10.02□□□□□ -0.81
DDX41-212ENST00000511040 CDKN1BP46527 198 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 TAS2R45P59539 299 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 RANP62826 216 aaKnown RBP10.02□□□□□ -0.81
DDX41-212ENST00000511040 RRN3P1Q2M238 152 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 C12orf74Q32Q52 190 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 RPL7L1Q6DKI1 246 aaKnown RBP10.02□□□□□ -0.81
DDX41-212ENST00000511040 OR10G4Q8NGN3 311 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 OR10G9Q8NGN4 311 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 OR10G7Q8NGN6 311 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 LINC01587Q99440 93 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 PLA2G2EQ9NZK7 142 aa10.02□□□□□ -0.81
DDX41-212ENST00000511040 SACSQ9NZJ4 4579 aa10.01□□□□□ -0.81
DDX41-212ENST00000511040 A0A1W2PPV4 95 aa10.01□□□□□ -0.81
DDX41-212ENST00000511040 HTN1P15515 57 aa10.01□□□□□ -0.81
DDX41-212ENST00000511040 YTHDF2Q9Y5A9 579 aaKnown RBP10.01□□□□□ -0.81
DDX41-212ENST00000511040 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
DDX41-212ENST00000511040 BORCS7-ASMTA0A0B4J1R7 106 aa10□□□□□ -0.81
DDX41-212ENST00000511040 TMEM189A5PLL7 270 aa10□□□□□ -0.81
DDX41-212ENST00000511040 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
DDX41-212ENST00000511040 AZU1P20160 251 aa10□□□□□ -0.81
DDX41-212ENST00000511040 TSPOP30536 169 aa10□□□□□ -0.81
DDX41-212ENST00000511040 FAM222AQ5U5X8 452 aa10□□□□□ -0.81
DDX41-212ENST00000511040 GFI1BQ5VTD9 330 aa10□□□□□ -0.81
DDX41-212ENST00000511040 OR2G3Q8NGZ4 309 aa10□□□□□ -0.81
DDX41-212ENST00000511040 LYSTQ99698 3801 aa10□□□□□ -0.81
DDX41-212ENST00000511040 VGLL1Q99990 258 aa10□□□□□ -0.81
DDX41-212ENST00000511040 PSMG3Q9BT73 122 aaPredicted RBP10□□□□□ -0.81
DDX41-212ENST00000511040 AGPAT4-IT1Q9H0P7 198 aa10□□□□□ -0.81
DDX41-212ENST00000511040 Q9H3A6 140 aa10□□□□□ -0.81
DDX41-212ENST00000511040 DKK2Q9UBU2 259 aa10□□□□□ -0.81
DDX41-212ENST00000511040 PLECQ15149 4684 aaKnown RBP10□□□□□ -0.81
DDX41-212ENST00000511040 LEPP41159 167 aa9.99□□□□□ -0.81
DDX41-212ENST00000511040 CDC34P49427 236 aaPredicted RBP9.99□□□□□ -0.81
DDX41-212ENST00000511040 C2CD4CQ8TF44 421 aa9.99□□□□□ -0.81
DDX41-212ENST00000511040 TRAV10A0A0B4J240 114 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 TRAV12-3A0A0B4J271 114 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 IGLL5B9A064 214 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 ARL14EPLP0DKL9 152 aa9.98□□□□□ -0.81
DDX41-212ENST00000511040 TMEM256Q8N2U0 113 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms