RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 WFDC5Q8TCV5 224 aa1.97□□□□□ -2.09
MBD4-209ENST00000511009 MIXL1Q9H2W2 232 aa1.97□□□□□ -2.09
MBD4-209ENST00000511009 LHFPL6Q9Y693 200 aa1.97□□□□□ -2.09
MBD4-209ENST00000511009 MYH7P12883 1935 aa1.97□□□□□ -2.09
MBD4-209ENST00000511009 BAHCC1Q9P281 2608 aa1.97□□□□□ -2.09
MBD4-209ENST00000511009 CEP250Q9BV73 2442 aa1.97□□□□□ -2.09
MBD4-209ENST00000511009 CHD9Q3L8U1 2897 aa1.96□□□□□ -2.09
MBD4-209ENST00000511009 COL4A6Q14031 1691 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 PARP14Q460N5 1801 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 LAMA2P24043 3122 aaKnown RBP1.96□□□□□ -2.1
MBD4-209ENST00000511009 IGKV1D-42A0A075B6H8 117 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 ARL5CA6NH57 179 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 AIPO00170 330 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 C1QBP02746 253 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 SHBGP04278 402 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 RPSAP08865 295 aaKnown RBP1.96□□□□□ -2.1
MBD4-209ENST00000511009 FKBP2P26885 142 aaKnown RBP1.96□□□□□ -2.1
MBD4-209ENST00000511009 PHBP35232 272 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 Q1T7F1 81 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 SPANXN5Q5MJ07 72 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 C9orf163Q8N9P6 203 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 NEK7Q8TDX7 302 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 ZNF625Q96I27 306 aaPredicted RBP1.96□□□□□ -2.1
MBD4-209ENST00000511009 LXNQ9BS40 222 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 NHP2Q9NX24 153 aaKnown RBP1.96□□□□□ -2.1
MBD4-209ENST00000511009 MED29Q9NX70 200 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 PRNDQ9UKY0 176 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 SSR3Q9UNL2 185 aa1.96□□□□□ -2.1
MBD4-209ENST00000511009 AMMECR1Q9Y4X0 333 aaPredicted RBP1.96□□□□□ -2.1
MBD4-209ENST00000511009 FAM208BQ5VWN6 2430 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 C7orf71A4D174 169 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 TMEM212A6NML5 194 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 H7C1C5 153 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 J3QKU1 62 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 CTSDP07339 412 aaPredicted RBP1.95□□□□□ -2.1
MBD4-209ENST00000511009 TAS2R41P59536 307 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 LCN6P62502 163 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 GNG5P63218 68 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 RRN3P1Q2M238 152 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 TRIQKQ629K1 86 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 ZNF826PQ6ZT77 177 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 TSTD1Q8NFU3 115 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 AQP3Q92482 292 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 HOPXQ9BPY8 73 aaPredicted RBP1.95□□□□□ -2.1
MBD4-209ENST00000511009 GINS3Q9BRX5 216 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 TMEM70Q9BUB7 260 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 PBDC1Q9BVG4 233 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 SLC35A3Q9Y2D2 325 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 V9GYQ6 96 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 SPTBN5Q9NRC6 3674 aaKnown RBP1.95□□□□□ -2.1
MBD4-209ENST00000511009 MYH7BA7E2Y1 1941 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 BAZ2BQ9UIF8 2168 aaKnown RBP1.95□□□□□ -2.1
MBD4-209ENST00000511009 CHD7Q9P2D1 2997 aa1.95□□□□□ -2.1
MBD4-209ENST00000511009 ANKRD11Q6UB99 2663 aaPredicted RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 TRANK1O15050 2925 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 CNOT1A5YKK6 2376 aaKnown RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 PKD1L2Q7Z442 2459 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 MDC1Q14676 2089 aaKnown RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 MYH6P13533 1939 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 TCTAP57738 103 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 GNG3P63215 75 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 TSNQ15631 228 aaKnown RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 BCL2L15Q5TBC7 163 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 Q6ZRN7 208 aaPredicted RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 FP248Q71RG6 208 aaPredicted RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 DEFB124Q8NES8 71 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 OR13D1Q8NGV5 346 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 ADAT3Q96EY9 351 aaPredicted RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 Q96M85 177 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 YPEL2Q96QA6 119 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 SELENOSQ9BQE4 189 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 SLC50A1Q9BRV3 221 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 LYRM2Q9NU23 88 aaPredicted RBP1.94□□□□□ -2.1
MBD4-209ENST00000511009 TAS2R4Q9NYW5 299 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 SS18L2Q9UHA2 77 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 EYSQ5T1H1 3165 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 CDH23Q9H251 3354 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 MYH11P35749 1972 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 OTOGLQ3ZCN5 2332 aa1.94□□□□□ -2.1
MBD4-209ENST00000511009 CEP295Q9C0D2 2601 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 MAP1BP46821 2468 aaKnown RBP1.93□□□□□ -2.1
MBD4-209ENST00000511009 SDK1Q7Z5N4 2213 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 TAX1BP3O14907 124 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 APODP05090 189 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 ZNF846Q147U1 533 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 SCGB2B2Q4G0G5 96 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 PHF13Q86YI8 300 aaPredicted RBP1.93□□□□□ -2.1
MBD4-209ENST00000511009 SMIM20Q8N5G0 67 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 OR2T10Q8NGZ9 312 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 STAG3L4Q8TBR4 150 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 TCEAL4Q96EI5 215 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 SH3BGRL3Q9H299 93 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 BIN3Q9NQY0 253 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 DOCK10Q96BY6 2186 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 F5P12259 2224 aa1.93□□□□□ -2.1
MBD4-209ENST00000511009 FASNP49327 2511 aaKnown RBP1.92□□□□□ -2.1
MBD4-209ENST00000511009 TRGV10A0A0A0MS01 117 aa1.92□□□□□ -2.1
MBD4-209ENST00000511009 TRAV14DV4A0A0A6YYC5 116 aa1.92□□□□□ -2.1
MBD4-209ENST00000511009 IGKV1-9A0A0C4DH69 117 aa1.92□□□□□ -2.1
MBD4-209ENST00000511009 TRBV6-5A0A0K0K1A5 114 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms