RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 FUT9Q9Y231 359 aa9.73□□□□□ -0.85
SNF8-206ENST00000509989 ZNF705GA8MUZ8 300 aaPredicted RBP9.72□□□□□ -0.85
SNF8-206ENST00000509989 BOLA2-SMG1P6H3BVE0 249 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 HMGB3O15347 200 aaKnown RBP9.72□□□□□ -0.85
SNF8-206ENST00000509989 DUSP14O95147 198 aaKnown RBP9.72□□□□□ -0.85
SNF8-206ENST00000509989 HIST1H1EP10412 219 aaKnown RBP9.72□□□□□ -0.85
SNF8-206ENST00000509989 AZU1P20160 251 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 RHOBP62745 196 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 C12orf74Q32Q52 190 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 Q6ZTC4 211 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 S100A7AQ86SG5 101 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 HSD17B11Q8NBQ5 300 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 IGF2BP2-AS1Q96M15 143 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 SH3BGRL3Q9H299 93 aa9.72□□□□□ -0.85
SNF8-206ENST00000509989 FXYD6-FXYD2A0A087WZ82 144 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 C17orf112F2Z3M2 114 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 J3KRW8 73 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 IFNA5P01569 189 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 CT45A10P0DMU9 189 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 OR2T35Q8NGX2 323 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 SCGB1C1Q8TD33 95 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 OR51M1Q9H341 326 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 TNFSF18Q9UNG2 199 aa9.71□□□□□ -0.86
SNF8-206ENST00000509989 ATP6V0CP27449 155 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 ICAM4Q14773 271 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 RPL7L1Q6DKI1 246 aaKnown RBP9.7□□□□□ -0.86
SNF8-206ENST00000509989 FAM122CQ6P4D5 195 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 Q6ZQT7 251 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 SSX7Q7RTT5 188 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 RPP25LQ8N5L8 163 aaKnown RBP9.7□□□□□ -0.86
SNF8-206ENST00000509989 NEU1Q99519 415 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 PAXXQ9BUH6 204 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 TIMM9Q9Y5J7 89 aa9.7□□□□□ -0.86
SNF8-206ENST00000509989 IGKV2-40A0A087WW87 121 aaPredicted RBP9.69□□□□□ -0.86
SNF8-206ENST00000509989 PLAC8L1A1L4L8 177 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 NPIPB6E9PJ23 425 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 IGKV2D-40P01614 121 aaPredicted RBP9.69□□□□□ -0.86
SNF8-206ENST00000509989 NBEAP1P0C6P0 100 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 GUK1Q16774 197 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 RNF141Q8WVD5 230 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 MRPL32Q9BYC8 188 aaKnown RBP9.69□□□□□ -0.86
SNF8-206ENST00000509989 AGPAT4-IT1Q9H0P7 198 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 RNF24Q9Y225 148 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 GOLT1BQ9Y3E0 138 aa9.69□□□□□ -0.86
SNF8-206ENST00000509989 LOC102723971A0A1B0GUV8 181 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 NUPR2A6NF83 97 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 OR7C2O60412 319 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 ZNF253O75346 499 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 INSP01308 110 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 GFI1BQ5VTD9 330 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 OR11H4Q8NGC9 324 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 VGLL1Q99990 258 aa9.68□□□□□ -0.86
SNF8-206ENST00000509989 YTHDF2Q9Y5A9 579 aaKnown RBP9.68□□□□□ -0.86
SNF8-206ENST00000509989 RANP62826 216 aaKnown RBP9.67□□□□□ -0.86
SNF8-206ENST00000509989 PRR9Q5T870 116 aa9.67□□□□□ -0.86
SNF8-206ENST00000509989 FAM222AQ5U5X8 452 aa9.67□□□□□ -0.86
SNF8-206ENST00000509989 TMEM208Q9BTX3 173 aa9.67□□□□□ -0.86
SNF8-206ENST00000509989 CYTL1Q9NRR1 136 aa9.67□□□□□ -0.86
SNF8-206ENST00000509989 KCNIP2Q9NS61 270 aa9.67□□□□□ -0.86
SNF8-206ENST00000509989 DKK2Q9UBU2 259 aa9.67□□□□□ -0.86
SNF8-206ENST00000509989 ARPC5O15511 151 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 HBE1P02100 147 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 HTN1P15515 57 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 M6PRP20645 277 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 CDKN1BP46527 198 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 UBE2L3P68036 154 aaKnown RBP9.66□□□□□ -0.86
SNF8-206ENST00000509989 CD300CQ08708 224 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 RRN3P1Q2M238 152 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 OR10G4Q8NGN3 311 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 OR10G9Q8NGN4 311 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 OR10G7Q8NGN6 311 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 OR10J6PQ8NGY7 276 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 LINC00476Q8WZB0 136 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 FAM19A4Q96LR4 140 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 LINC01587Q99440 93 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 Q9H3A6 140 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 PPP1R14DQ9NXH3 145 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 APLNQ9ULZ1 77 aa9.66□□□□□ -0.86
SNF8-206ENST00000509989 DNAH6Q9C0G6 4158 aa9.65□□□□□ -0.86
SNF8-206ENST00000509989 SMIM9A6NGZ8 99 aa9.65□□□□□ -0.86
SNF8-206ENST00000509989 AMBPP02760 352 aa9.65□□□□□ -0.86
SNF8-206ENST00000509989 PDE6HQ13956 83 aa9.65□□□□□ -0.86
SNF8-206ENST00000509989 ZNF726P1Q15940 193 aa9.65□□□□□ -0.86
SNF8-206ENST00000509989 ACOT6Q3I5F7 207 aaPredicted RBP9.65□□□□□ -0.86
SNF8-206ENST00000509989 Q8TAT8 98 aa9.65□□□□□ -0.86
SNF8-206ENST00000509989 KMT2AQ03164 3969 aa9.65□□□□□ -0.86
SNF8-206ENST00000509989 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
SNF8-206ENST00000509989 IGLL5B9A064 214 aa9.64□□□□□ -0.87
SNF8-206ENST00000509989 BTN1A1Q13410 526 aa9.64□□□□□ -0.87
SNF8-206ENST00000509989 INO80EQ8NBZ0 244 aaPredicted RBP9.64□□□□□ -0.87
SNF8-206ENST00000509989 OR2G3Q8NGZ4 309 aa9.64□□□□□ -0.87
SNF8-206ENST00000509989 ASB13Q8WXK3 278 aa9.64□□□□□ -0.87
SNF8-206ENST00000509989 MRPL53Q96EL3 112 aaKnown RBP9.64□□□□□ -0.87
SNF8-206ENST00000509989 EPPK1P58107 5090 aaKnown RBP9.64□□□□□ -0.87
SNF8-206ENST00000509989 DNAH10Q8IVF4 4471 aa9.64□□□□□ -0.87
SNF8-206ENST00000509989 LY6G6CO95867 125 aa9.63□□□□□ -0.87
SNF8-206ENST00000509989 SPART-AS1P0CW21 52 aa9.63□□□□□ -0.87
SNF8-206ENST00000509989 ARL14EPLP0DKL9 152 aa9.63□□□□□ -0.87
SNF8-206ENST00000509989 CDC34P49427 236 aaPredicted RBP9.63□□□□□ -0.87
SNF8-206ENST00000509989 GNG5P63218 68 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms