RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 CEND1Q8N111 149 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 TMEM256Q8N2U0 113 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 TOMM5Q8N4H5 51 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 RAB42Q8N4Z0 105 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 OR10G2Q8NGC3 310 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 RFESDQ8TAC1 157 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 TMEM131Q92545 1883 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 PHF3Q92576 2039 aaKnown RBP3.4□□□□□ -1.87
NIPBL-206ENST00000509429 DSCR8Q96T75 97 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 CHAC1Q9BUX1 264 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 MANBALQ9NQG1 85 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 CYTL1Q9NRR1 136 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 HHLA3Q9XRX5 114 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 LSM2Q9Y333 95 aaKnown RBP3.4□□□□□ -1.87
NIPBL-206ENST00000509429 F11RQ9Y624 299 aaKnown RBP3.4□□□□□ -1.87
NIPBL-206ENST00000509429 V9GY05 133 aa3.4□□□□□ -1.87
NIPBL-206ENST00000509429 TRBV6-7A0A0A0MS04 114 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 TRAV1-1A0A0B4J248 108 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 LOC389332A0A1B0GUA5 103 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 PSPHP1O15172 72 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 OR1I1O60431 355 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF324O75467 553 aaPredicted RBP3.39□□□□□ -1.87
NIPBL-206ENST00000509429 FSTL3O95633 263 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 SOD1P00441 154 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 TRBV12-3P01733 135 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 IGKCP01834 107 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 CD7P09564 240 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF823P16415 610 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 LMO2P25791 158 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 MPV17P39210 176 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 LINC00313P59037 77 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 HBBP68871 147 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 C6orf99Q4VX62 202 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 WDR38Q5JTN6 314 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 FAM78AQ5JUQ0 283 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 LINC00242Q5T6M2 205 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 FAM219BQ5XKK7 198 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 FP248Q71RG6 208 aaPredicted RBP3.39□□□□□ -1.87
NIPBL-206ENST00000509429 OR8B3Q8NGG8 313 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 C10orf105Q8TEF2 133 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 CCL13Q99616 98 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 CST11Q9H112 138 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 DOCK4Q8N1I0 1966 aa3.39□□□□□ -1.87
NIPBL-206ENST00000509429 ZFC3H1O60293 1989 aaKnown RBP3.38□□□□□ -1.87
NIPBL-206ENST00000509429 IGLV3-10A0A075B6K4 115 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 IGHV6-1A0A0B4J1U7 121 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 LOC285095A0A1B0GVY8 99 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 INS-IGF2F8WCM5 200 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 HCRTO43612 131 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 CDK2AP2O75956 126 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 SRP19P09132 144 aaKnown RBP3.38□□□□□ -1.87
NIPBL-206ENST00000509429 SSR2P43308 183 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 CSN1S1P47710 185 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 KRTDAPP60985 99 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 ERVK-16P61578 105 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 SNRPD3P62318 126 aaKnown RBP3.38□□□□□ -1.87
NIPBL-206ENST00000509429 ORMDL2Q53FV1 153 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 CLLU1OSQ5K130 101 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 Q6ZQT7 251 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 FOXL2NBQ6ZUU3 175 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 PRNTQ86SH4 94 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 NFE4Q86UQ8 179 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 Q8N2B8 174 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 CHCHD10Q8WYQ3 142 aaPredicted RBP3.38□□□□□ -1.87
NIPBL-206ENST00000509429 PGLYRP4Q96LB8 373 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 C17orf77Q96MU5 243 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 PGLYRP2Q96PD5 576 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 RHNO1Q9BSD3 238 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 GABARAPL3Q9BY60 117 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 SPRR3Q9UBC9 169 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 XCL2Q9UBD3 114 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 LINC00588Q9Y4M8 146 aa3.38□□□□□ -1.87
NIPBL-206ENST00000509429 TRBV5-3A0A0A0MS03 114 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 hADV29S1A0JD25 119 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 IGLL5B9A064 214 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 ATOX1O00244 68 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 COX7A2LO14548 114 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 ZNHIT1O43257 154 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 IGHV3-9P01782 118 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 C3orf79P0CE67 100 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 ZNF883P0CG24 379 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 UBE2G1P62253 170 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 RPL38P63173 70 aaKnown RBP3.37□□□□□ -1.87
NIPBL-206ENST00000509429 CCL8P80075 99 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 KIAA0087Q14695 138 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 CFAP126Q5VTH2 177 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 TMEM136Q6ZRR5 245 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 OR5AS1Q8N127 324 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 CYB561D1Q8N8Q1 229 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 MORN4Q8NDC4 146 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 AQP3Q92482 292 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 H1FXQ92522 213 aaKnown RBP3.37□□□□□ -1.87
NIPBL-206ENST00000509429 FAM3DQ96BQ1 224 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 LINC01600Q96MT4 127 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 HDHD3Q9BSH5 251 aaPredicted RBP3.37□□□□□ -1.87
NIPBL-206ENST00000509429 SCRT2Q9NQ03 307 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 SELENOKQ9Y6D0 94 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 EP400Q96L91 3159 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 KIAA1671Q9BY89 1806 aa3.37□□□□□ -1.87
NIPBL-206ENST00000509429 HELZP42694 1942 aaKnown RBP3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms