RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 PTPRBP23467 1997 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 CABIN1Q9Y6J0 2220 aa3.05□□□□□ -1.92
NEDD4-209ENST00000508871 TRAV3A0A0B4J244 114 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 C5orf63A6NC05 138 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 GEMIN2O14893 280 aaKnown RBP3.04□□□□□ -1.92
NEDD4-209ENST00000508871 IGLV2-14P01704 120 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 LINC00694P0DN24 101 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 FOXF1Q12946 379 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 C9orf139Q6ZV77 190 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 WDR86Q86TI4 376 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 C11orf53Q8IXP5 236 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 CLDND2Q8NHS1 167 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 TMEM254Q8TBM7 123 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 CCL17Q92583 94 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 UTRNP46939 3433 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV3OR16-9A0A0B4J2B5 98 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 KRTAP23-1A1A580 65 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 J3QLW9 94 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 GYPAP02724 150 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 CD7P09564 240 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 TAS2R4Q9NYW5 299 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 R4GMQ9 66 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 PATE3B3GLJ2 98 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 BRI3O95415 125 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 APCSP02743 223 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 SCTP09683 121 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 TRGC1P0CF51 173 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 XCL2Q9UBD3 114 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 PHLDA3Q9Y5J5 127 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 V9GYH0 126 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 TRAV41A0A0B4J266 112 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 TRBV12-3P01733 135 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 IGLL1P15814 213 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 SNRPD3P62318 126 aaKnown RBP3.04□□□□□ -1.92
NEDD4-209ENST00000508871 CASC2Q6XLA1 102 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 SCN3AQ9NY46 2000 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 FAM236AA0A1B0GUQ0 79 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 FAM236BA0A1B0GV22 79 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 SDCBPO00560 298 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF253O75346 499 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 CCL1P22362 96 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 PSG7Q13046 419 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 KLF17Q5JT82 389 aaPredicted RBP3.04□□□□□ -1.92
NEDD4-209ENST00000508871 VAX1Q5SQQ9 334 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 PROK2Q9HC23 129 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 OTORQ9NRC9 128 aa3.04□□□□□ -1.92
NEDD4-209ENST00000508871 HMSDA8MTL9 139 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 NXPH4O95158 308 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 GNLYP22749 145 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 NFYAP23511 347 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-209ENST00000508871 IGFL2Q6UWQ7 119 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 RPS19BP1Q86WX3 136 aaKnown RBP3.03□□□□□ -1.92
NEDD4-209ENST00000508871 FAM216BQ8N7L0 139 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 SLC25A29Q8N8R3 303 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 C5orf17Q8NAS9 161 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 IGKV3D-15A0A087WSY6 115 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 RPL36A-HNRNPH2H7BZ11 118 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 RRN3P1Q2M238 152 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 UFSP1Q6NVU6 142 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 TMEM91Q6ZNR0 172 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 CLEC2BQ92478 149 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 OR8B2Q96RD0 313 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 SPCS1Q9Y6A9 102 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 TDRD6O60522 2096 aaKnown RBP3.03□□□□□ -1.92
NEDD4-209ENST00000508871 IGLV8-61A0A075B6I0 122 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 NAP1L6A6NFF2 107 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF73O43830 326 aaPredicted RBP3.03□□□□□ -1.92
NEDD4-209ENST00000508871 NDUFB6O95139 128 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 UBL3O95164 117 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV1-69P01742 117 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 IGHG4P01861 327 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 ZNF823P16415 610 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 MPV17P39210 176 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 FOXE3Q13461 319 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 YIPF7Q8N8F6 280 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 IGHV1-58A0A0C4DH39 117 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 UQCRQO14949 82 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 PLA2G10O15496 165 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 SH2D1AO60880 128 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 PAX1P15863 534 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 NNATQ16517 81 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 LUZP6Q538Z0 58 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 C2orf82Q6UX34 121 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 ALKAL2Q6UX46 152 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 MDS2Q8NDY4 140 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 TSKUQ8WUA8 353 aa3.03□□□□□ -1.92
NEDD4-209ENST00000508871 CCL4P13236 92 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 DSCR9P59020 149 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 Q0VFX4 171 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 PMCHL1Q16048 86 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 C11orf71Q6IPW1 123 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 C6orf201Q7Z4U5 140 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 IGHV6-1A0A0B4J1U7 121 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 LEPROTO15243 131 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 IGLV3-1P01715 115 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 IGHV3-9P01782 118 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 EVX1P49640 407 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 PLGLB1Q02325 96 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 C10orf25Q5T742 122 aa3.02□□□□□ -1.93
NEDD4-209ENST00000508871 OR10AC1Q8NH08 325 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms