RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 BPIFA4PQ86YQ2 179 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 BAP18Q8IXM2 172 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR8I2Q8N0Y5 310 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 HSD17B11Q8NBQ5 300 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 STXBP6Q8NFX7 210 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 TMEM37Q8WXS4 190 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 SLC25A39Q9BZJ4 359 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 CYTL1Q9NRR1 136 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 CLEC5AQ9NY25 188 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 MLXQ9UH92 298 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 PAM16Q9Y3D7 125 aa4.11□□□□□ -1.75
HMGB1P44-201ENST00000508597 IGHV3OR16-8A0A075B7F1 116 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 A0A087X0K7 114 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 A0A1W2PPV4 95 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR4C46A6NHA9 309 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 DNASE2O00115 360 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 SPP1P10451 314 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 GP9P14770 177 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 ATP6V0CP27449 155 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 RAB5CP51148 216 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 GUK1Q16774 197 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 FFAR4Q5NUL3 377 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 AKR1C8PQ5T2L2 129 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 PATE2Q6UY27 113 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 DPPA3Q6W0C5 159 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 SIGLEC15Q6ZMC9 328 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 TCF24Q7RTU0 167 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 GTSCR1Q86UQ5 136 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 TMEM61Q8N0U2 210 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 NEXN-AS1Q8NBZ9 246 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 PHYHIPLQ96FC7 376 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 RSG1Q9BU20 258 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF471Q9BX82 626 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 NRN1Q9NPD7 142 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 TMEM14CQ9P0S9 112 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 FUT9Q9Y231 359 aa4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF256Q9Y2P7 627 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P44-201ENST00000508597 G3V4G9 280 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 ZNF253O75346 499 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 APOHP02749 345 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 HIST1H1EP10412 219 aaKnown RBP4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 ID1P41134 155 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 SNRPD3P62318 126 aaKnown RBP4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 PDE6HQ13956 83 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 KHDC3LQ587J8 217 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 TMEM41BQ5BJD5 291 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 FAM78BQ5VT40 261 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 C9orf62Q8N4C0 152 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR10G4Q8NGN3 311 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR10G9Q8NGN4 311 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 OR10G7Q8NGN6 311 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 SLC50A1Q9BRV3 221 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 ACTR3CQ9C0K3 210 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 SLC25A22Q9H936 323 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 DOK5Q9P104 306 aa4.09□□□□□ -1.75
HMGB1P44-201ENST00000508597 IGHV3OR16-13A0A075B7E8 117 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 IGHV3-49A0A0A0MS15 119 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 IGHV3-74A0A0B4J1X5 117 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 CTXND1A0A1B0GTU2 59 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 K7EQG2 157 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 ISLRO14498 428 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 MRPS12O15235 138 aaKnown RBP4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 STAG3L2P0CL84 134 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 STAG3L3P0CL85 134 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 CDC34P49427 236 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 PSMB3P49720 205 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 NANOS2P60321 138 aaKnown RBP4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 PSG9Q00887 426 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 CD300CQ08708 224 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 GUCA2BQ16661 112 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 SPATA31B1PQ5VZV4 182 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 LCN15Q6UWW0 184 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 LYPD1Q8N2G4 141 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 PRR26Q8N8Z3 221 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 LRRC20Q8TCA0 184 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 DCANP1Q8TF63 244 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 SAT2Q96F10 170 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 UHRF2Q96PU4 802 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 SCRT1Q9BWW7 348 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 MS4A6AQ9H2W1 248 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 OR51M1Q9H341 326 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 HRH4Q9H3N8 390 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 RPRMQ9NS64 109 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 PRELID1Q9Y255 219 aa4.08□□□□□ -1.76
HMGB1P44-201ENST00000508597 IGHV3-66A0A0C4DH42 116 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 IZUMO1RA6ND01 250 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 OR11H12B2RN74 326 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 TEX46H3BTG2 121 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 OR7C2O60412 319 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 GAGE7O76087 117 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 CXorf1O96002 111 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 NBEAP1P0C6P0 100 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 GAGE12FP0CL80 117 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 GAGE12GP0CL81 117 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 GAGE12IP0CL82 117 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 IGLC2P0DOY2 106 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 SULT1A2P50226 295 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 PPT1P50897 306 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 RAB2AP61019 212 aa4.07□□□□□ -1.76
HMGB1P44-201ENST00000508597 GAGE1Q13065 139 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms