RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 A8MTW9 85 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 ZNF705EA8MWA4 302 aaPredicted RBP7.58□□□□□ -1.2
HTT-204ENST00000508321 H3BTX0 84 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 UBE2CO00762 179 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 IFNA7P01567 189 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 FRMD6-AS1P0C7T7 363 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 FHITP49789 147 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 NUTF2P61970 127 aaKnown RBP7.58□□□□□ -1.2
HTT-204ENST00000508321 BLOC1S1P78537 153 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 ACTL10Q5JWF8 245 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 ALKAL2Q6UX46 152 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 TRPT1Q86TN4 253 aaKnown RBP7.58□□□□□ -1.2
HTT-204ENST00000508321 RNF182Q8N6D2 247 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 OR8A1Q8NGG7 326 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 OR10J6PQ8NGY7 276 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 CMTM2Q8TAZ6 248 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 SFT2D1Q8WV19 159 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 RPUSD4Q96CM3 377 aaKnown RBP7.58□□□□□ -1.2
HTT-204ENST00000508321 ODF3Q96PU9 254 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 PLA2G2EQ9NZK7 142 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 BOLA1Q9Y3E2 137 aa7.58□□□□□ -1.2
HTT-204ENST00000508321 RBAKDNA6NC62 111 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 H3BMM0 161 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 SLC25A5P05141 298 aaKnown RBP7.57□□□□□ -1.2
HTT-204ENST00000508321 TAGLN2P37802 199 aaKnown RBP7.57□□□□□ -1.2
HTT-204ENST00000508321 RANP62826 216 aaKnown RBP7.57□□□□□ -1.2
HTT-204ENST00000508321 ICAM4Q14773 271 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 LINC00322Q6ZN03 302 aaPredicted RBP7.57□□□□□ -1.2
HTT-204ENST00000508321 C5orf17Q8NAS9 161 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 B9D2Q9BPU9 175 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 TXNDC17Q9BRA2 123 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 C1QTNF4Q9BXJ3 329 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 MANBALQ9NQG1 85 aa7.57□□□□□ -1.2
HTT-204ENST00000508321 RBMY1BA6NDE4 496 aaKnown RBP7.56□□□□□ -1.2
HTT-204ENST00000508321 RBMY1EA6NEQ0 496 aaKnown RBP7.56□□□□□ -1.2
HTT-204ENST00000508321 FBLL1A6NHQ2 334 aaKnown RBP7.56□□□□□ -1.2
HTT-204ENST00000508321 KNCNA6PVL3 124 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 K7EQM0 130 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 IFNA1P01562 189 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 AMBPP02760 352 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 SNRPCP09234 159 aaKnown RBP7.56□□□□□ -1.2
HTT-204ENST00000508321 RBMY1DP0C7P1 496 aaKnown RBP7.56□□□□□ -1.2
HTT-204ENST00000508321 FGF8P55075 233 aaPredicted RBP7.56□□□□□ -1.2
HTT-204ENST00000508321 HIST1H1AQ02539 215 aaPredicted RBP7.56□□□□□ -1.2
HTT-204ENST00000508321 PMS2P11Q13670 270 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 DEFB121Q5J5C9 76 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 IGFL4Q6B9Z1 124 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 TEX261Q6UWH6 196 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 EXOC3-AS1Q8N2X6 119 aa7.56□□□□□ -1.2
HTT-204ENST00000508321 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
HTT-204ENST00000508321 AGRNO00468 2067 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 TRBV7-9A0A0J9YWB2 115 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 FAM74A7A6NL05 159 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 GGTLC3B5MD39 225 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 NPIPB6E9PJ23 425 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 M0R3E3 92 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 EIF3GO75821 320 aaKnown RBP eCLIP7.55□□□□□ -1.2
HTT-204ENST00000508321 HLA-DMBP28068 263 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 CNN1P51911 297 aaKnown RBP7.55□□□□□ -1.2
HTT-204ENST00000508321 ZNF124Q15973 351 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 GDF5OSQ5U4N7 250 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 CSTL1Q9H114 145 aa7.55□□□□□ -1.2
HTT-204ENST00000508321 PGPA6NDG6 321 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 DIRC3C9JPN6 131 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 F6UB75 175 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 NHLRC4P0CG21 123 aaPredicted RBP7.54□□□□□ -1.2
HTT-204ENST00000508321 RPL35AP18077 110 aaKnown RBP7.54□□□□□ -1.2
HTT-204ENST00000508321 TSPOP30536 169 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 TMEM78Q5T7P6 136 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 C9orf47Q6ZRZ4 202 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 Q6ZWC4 215 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 CYB561D1Q8N8Q1 229 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 ZNF680Q8NEM1 530 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 OR4B1Q8NGF8 309 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 LYPD6BQ8NI32 183 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 HIST1H2BAQ96A08 127 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 SPATA25Q9BR10 227 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 ATG101Q9BSB4 218 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 TMPRSS5Q9H3S3 457 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 TP53TG1Q9Y2A0 90 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 LENEPQ9Y5L5 61 aa7.54□□□□□ -1.2
HTT-204ENST00000508321 ZNF705FA8MVS1 300 aaPredicted RBP7.53□□□□□ -1.2
HTT-204ENST00000508321 F6UZH7 168 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 CA1P00915 261 aaPredicted RBP7.53□□□□□ -1.2
HTT-204ENST00000508321 TCRAP04437 139 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 NMBP08949 121 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 LEPP41159 167 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 UBE2G2P60604 165 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 HAGHQ16775 308 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 AMTNQ6UX39 209 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 ZNF767PQ75MW2 155 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 LINC00477Q96M19 166 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 PPP1R14DQ9NXH3 145 aa7.53□□□□□ -1.2
HTT-204ENST00000508321 YTHDF2Q9Y5A9 579 aaKnown RBP7.53□□□□□ -1.2
HTT-204ENST00000508321 PAGE4O60829 102 aa7.52□□□□□ -1.21
HTT-204ENST00000508321 INSP01308 110 aa7.52□□□□□ -1.21
HTT-204ENST00000508321 BCL2P10415 239 aa7.52□□□□□ -1.21
HTT-204ENST00000508321 CDKN1BP46527 198 aa7.52□□□□□ -1.21
HTT-204ENST00000508321 SUMO1P63165 101 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms