RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 NRARPQ7Z6K4 114 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 SAT2Q96F10 170 aaPredicted RBP9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 UQCC1Q9NVA1 299 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 MUC4Q99102 2169 aa9.12□□□□□ -0.95
HMGCS1-205ENST00000508319 UBE2L5PA0A1B0GUS4 154 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 C5orf51A6NDU8 294 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 FAM24AA6NFZ4 105 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 MED14OSP0DP75 135 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 BCAP31P51572 246 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 RAB31Q13636 194 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 C12orf45Q8N5I9 185 aaPredicted RBP9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 OR10J6PQ8NGY7 276 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 C2orf50Q96LR7 162 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 C20orf144Q9BQM9 153 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 LYRM2Q9NU23 88 aaPredicted RBP9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 TIMM8BQ9Y5J9 83 aaPredicted RBP9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 PXMP4Q9Y6I8 212 aa9.11□□□□□ -0.95
HMGCS1-205ENST00000508319 TRAV5A0A0B4J249 113 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 IGSF23A1L1A6 192 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 A6NHS1 94 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 CBY3A6NI87 242 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 NUDT3O95989 172 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 SULT1A1P50225 295 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 S100A10P60903 97 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 IL15RAQ13261 267 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 SOHLH1Q5JUK2 328 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 C1orf134Q5TEV5 83 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 Q6ZRG5 221 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 LINC00612Q8N6U2 182 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 OR1L4Q8NGR5 311 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 ZNRF2Q8NHG8 242 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 RNF141Q8WVD5 230 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 ATG101Q9BSB4 218 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 CCDC32Q9BV29 185 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 DNAJC4Q9NNZ3 241 aa9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
HMGCS1-205ENST00000508319 LOC100996750A0A140TA64 210 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 NPIPB6E9PJ23 425 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 ZNF253O75346 499 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 H2AFB2P0C5Z0 115 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 PVALBP20472 110 aaPredicted RBP9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 RPL29P47914 159 aaKnown RBP9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 RAB32Q13637 225 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 GUK1Q16774 197 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 STX12Q86Y82 276 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 TMEM252Q8N6L7 170 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 ODF3Q96PU9 254 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 PFDN5Q99471 154 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 KRTAP4-6Q9BYQ5 205 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 SLC39A9Q9NUM3 307 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 ZNF586Q9NXT0 402 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 NDUFA13Q9P0J0 144 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 RYR1P21817 5038 aa9.09□□□□□ -0.95
HMGCS1-205ENST00000508319 CT45A10P0DMU9 189 aa9.08□□□□□ -0.96
HMGCS1-205ENST00000508319 S100A11P31949 105 aa9.08□□□□□ -0.96
HMGCS1-205ENST00000508319 BAXQ07812 192 aa9.08□□□□□ -0.96
HMGCS1-205ENST00000508319 ZNF575Q86XF7 245 aa9.08□□□□□ -0.96
HMGCS1-205ENST00000508319 CHAC2Q8WUX2 184 aa9.08□□□□□ -0.96
HMGCS1-205ENST00000508319 HSPG2P98160 4391 aa9.08□□□□□ -0.96
HMGCS1-205ENST00000508319 LRP1BQ9NZR2 4599 aa9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 TRBV19A0A075B6N1 114 aa9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 J3KRW8 73 aa9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 HBG1P69891 147 aa9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 HBG2P69892 147 aa9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 MRPL53Q96EL3 112 aaKnown RBP9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
HMGCS1-205ENST00000508319 TRAV12-3A0A0B4J271 114 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 FAM240BA0A1B0GVZ2 78 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 M0R3E3 92 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 NDUFB4O95168 129 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 HOXA5P20719 270 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 FGF7P21781 194 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 LEPP41159 167 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 CCL18P55774 89 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 GCSAMLQ5JQS6 135 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 NPCDR1Q9BY65 106 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 GPN1Q9HCN4 374 aaPredicted RBP9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 TMEM14CQ9P0S9 112 aa9.06□□□□□ -0.96
HMGCS1-205ENST00000508319 ABCA13Q86UQ4 5058 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 TRAV26-1A0A087WT03 109 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 GAGE12BA1L429 117 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 GAGE7O76087 117 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 RLN2P04090 185 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 GAGE12FP0CL80 117 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 GAGE12GP0CL81 117 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 GAGE12IP0CL82 117 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 PYYP10082 97 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 TNP2Q05952 138 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 ASAH1Q13510 395 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 PDE6HQ13956 83 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 SSX7Q7RTT5 188 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 CCDC28AQ8IWP9 274 aa9.05□□□□□ -0.96
HMGCS1-205ENST00000508319 SNURFLB1AK76 121 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 KLLNB2CW77 178 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 MPDU1O75352 247 aa9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 SLC25A5P05141 298 aaKnown RBP9.04□□□□□ -0.96
HMGCS1-205ENST00000508319 HIST1H1EP10412 219 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms