RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 TMEM213A2RRL7 107 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZNF785A8K8V0 405 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRSS47A8MTI9 375 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 OOSP1A8MZH6 123 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 B9A039 149 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 LINC01619G3V211 115 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 MRPS12O15235 138 aaKnown RBP3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 SNAI2O43623 268 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 NPYP01303 97 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRSS1P07477 247 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGLC6P0CF74 106 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 GCSHP23434 173 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 PLNP26678 52 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 LEPP41159 167 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 CRIP1P50238 77 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 RIPPLY3P57055 190 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 RPL24P83731 157 aaKnown RBP3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 PAX8Q06710 450 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 BSPH1Q075Z2 132 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 FAM27E3Q08E93 113 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 KLF17Q5JT82 389 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 LYRM7Q5U5X0 104 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 SAMD13Q5VXD3 122 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 PIP4P1Q86T03 277 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 BCL6BQ8N143 479 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 MTURNQ8N3F0 131 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 Q8N8P6 123 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 NPBQ8NG41 125 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 MYOZ3Q8TDC0 251 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 RAB37Q96AX2 223 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 RITA1Q96K30 269 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 C8orf49Q96NF6 230 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRR25Q96S07 402 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 JMJD8Q96S16 334 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 SIGMAR1Q99720 223 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 VGLL1Q99990 258 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 MCRIP2Q9BUT9 160 aaKnown RBP3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 CHAC1Q9BUX1 264 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 ZMAT4Q9H898 229 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 HIF1ANQ9NWT6 349 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 C21orf62Q9NYP8 219 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 DPM3Q9P2X0 92 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 CTSZQ9UBR2 303 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 TP73-AS1Q9UF72 201 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 HILPDAQ9Y5L2 63 aa3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 RAI1Q7Z5J4 1906 aaPredicted RBP3.89□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRR14LQ5THK1 2151 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 TMSB15BA0A087X1C1 80 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 PPIAL4CA0A0B4J2A2 164 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 A0A1B0GV72 72 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 LINC01549A6NIU2 74 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 NCBP2LA6PVI3 153 aaKnown RBP3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 LY6LH3BQJ8 138 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 K7EMI3 77 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 M0R1W7 72 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 SAP30O75446 220 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 NDUFA3O95167 84 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 TNFRSF6BO95407 300 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 ORM1P02763 201 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 PPIAL4GP0DN37 164 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 CNTFRP26992 372 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 SRSF6Q13247 344 aaKnown RBP3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 ODF1Q14990 250 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 KRTAP19-4Q3LI73 84 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 PRR31Q5SQ13 230 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 RUSC1-AS1Q66K80 236 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 CCDC144NLQ6NUI1 221 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 LHFPL4Q7Z7J7 247 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 CEND1Q8N111 149 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 TTC9CQ8N5M4 171 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 MRPL53Q96EL3 112 aaKnown RBP3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 SLC50A1Q9BRV3 221 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 VCX2Q9H322 139 aa3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 LAMA2P24043 3122 aaKnown RBP3.88□□□□□ -1.79
HMGB3P16-201ENST00000508037 IGLV11-55A0A075B6I3 123 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 TRAV12-1A0A0B4J245 112 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 KRTAP4-8A0A0G2JLE6 195 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 A0A0G2JNJ9 132 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 PCNX2A6NKB5 2137 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 E9PLD3 99 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 M0R3E3 92 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 TIMM23O14925 209 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 FCN3O75636 299 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 PPP1R17O96001 155 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 CD3EP07766 207 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 FAM106CPP0CH98 169 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 APELAP0DMC3 54 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 MED14OSP0DP75 135 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 EGR2P11161 476 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 SLC25A16P16260 332 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 COX7A1P24310 79 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 LOXL1Q08397 574 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 LAGE3Q14657 143 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 C5orf64Q2M2E5 130 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 CD300EQ496F6 205 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 FAM106AQ4KMX7 169 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 GFRALQ6UXV0 394 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 FOXI2Q6ZQN5 318 aa3.87□□□□□ -1.79
HMGB3P16-201ENST00000508037 PCP2Q8IVA1 136 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms