RNA–Protein interactions for RNA: ENST00000507955.5

DDX41-208, Transcript of DEAD-box helicase 41, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX41, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-208ENST00000507955 ATP5L2Q7Z4Y8 100 aa11.31□□□□□ -0.6
DDX41-208ENST00000507955 DAZAP1Q96EP5 407 aaKnown RBP11.31□□□□□ -0.6
DDX41-208ENST00000507955 LRRK2Q5S007 2527 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 CENPVL3A0A0U1RRI6 287 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 C15orf32Q32M92 178 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 Q6ZVH6 145 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 NRGNQ92686 78 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 C8orf49Q96NF6 230 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 ZNF462Q96JM2 2506 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 OVOL3O00110 214 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 IGLL1P15814 213 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 TSPOP30536 169 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 USP24Q9UPU5 2620 aa11.3□□□□□ -0.6
DDX41-208ENST00000507955 BTF3P20290 206 aaKnown RBP11.29□□□□□ -0.6
DDX41-208ENST00000507955 CRIP1P50238 77 aa11.29□□□□□ -0.6
DDX41-208ENST00000507955 IGHV3-49A0A0A0MS15 119 aa11.29□□□□□ -0.6
DDX41-208ENST00000507955 IGHV4-61A0A0C4DH41 118 aa11.29□□□□□ -0.6
DDX41-208ENST00000507955 SMIM12Q96EX1 92 aa11.29□□□□□ -0.6
DDX41-208ENST00000507955 ZFP30Q9Y2G7 519 aa11.29□□□□□ -0.6
DDX41-208ENST00000507955 IGKV2-40A0A087WW87 121 aaPredicted RBP11.28□□□□□ -0.6
DDX41-208ENST00000507955 NPFFO15130 113 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 IGKV2D-40P01614 121 aaPredicted RBP11.28□□□□□ -0.6
DDX41-208ENST00000507955 CLEC3BP05452 202 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 C1RLQ9NZP8 487 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 TRAV9-2A0A087WT02 112 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 A8MWL6 223 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 HINT1P49773 126 aaPredicted RBP11.28□□□□□ -0.6
DDX41-208ENST00000507955 ZNF492Q9P255 531 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 PSG8Q9UQ74 426 aa11.28□□□□□ -0.6
DDX41-208ENST00000507955 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 IGHV1-24A0A0C4DH33 117 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 MUC21A0A0G2JKD1 596 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 MUC21A0A140T8X8 626 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 OOSP1A8MZH6 123 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 ZNF207O43670 478 aaKnown RBP11.27□□□□□ -0.6
DDX41-208ENST00000507955 RHOGP84095 191 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 MUC21Q5SSG8 566 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 SMAD5-AS1Q9Y6J3 95 aa11.27□□□□□ -0.6
DDX41-208ENST00000507955 ZNF138P52744 262 aa11.27□□□□□ -0.61
DDX41-208ENST00000507955 KLHDC1Q8N7A1 406 aa11.27□□□□□ -0.61
DDX41-208ENST00000507955 THYN1Q9P016 225 aa11.27□□□□□ -0.61
DDX41-208ENST00000507955 TRAV30A0A087WSZ9 112 aa11.26□□□□□ -0.61
DDX41-208ENST00000507955 NPIPB6E9PJ23 425 aa11.26□□□□□ -0.61
DDX41-208ENST00000507955 APOHP02749 345 aaPredicted RBP11.26□□□□□ -0.61
DDX41-208ENST00000507955 PSG3Q16557 428 aa11.26□□□□□ -0.61
DDX41-208ENST00000507955 CT83Q5H943 113 aa11.26□□□□□ -0.61
DDX41-208ENST00000507955 CLEC19AQ6UXS0 136 aa11.26□□□□□ -0.61
DDX41-208ENST00000507955 Q8TAT8 98 aa11.26□□□□□ -0.61
DDX41-208ENST00000507955 TRAV40A0A0B4J280 105 aa11.26□□□□□ -0.61
DDX41-208ENST00000507955 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
DDX41-208ENST00000507955 PRB1P04280 392 aa11.25□□□□□ -0.61
DDX41-208ENST00000507955 LINC00614P0C842 121 aa11.25□□□□□ -0.61
DDX41-208ENST00000507955 TMEM70Q9BUB7 260 aa11.25□□□□□ -0.61
DDX41-208ENST00000507955 IGHV4-38-2P0DP08 117 aa11.25□□□□□ -0.61
DDX41-208ENST00000507955 MCRIP2Q9BUT9 160 aaKnown RBP11.25□□□□□ -0.61
DDX41-208ENST00000507955 LOC102724200A0A096LPH7 203 aaPredicted RBP11.24□□□□□ -0.61
DDX41-208ENST00000507955 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 LY6EQ16553 131 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 CCDC140Q96MF4 163 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 CCL19Q99731 98 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 MRPS16Q9Y3D3 137 aaKnown RBP11.24□□□□□ -0.61
DDX41-208ENST00000507955 ABCA12Q86UK0 2595 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 C16orf54Q6UWD8 224 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 RNF182Q8N6D2 247 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 VGLL1Q99990 258 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 GFRA4Q9GZZ7 299 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 AAMDCQ9H7C9 122 aa11.24□□□□□ -0.61
DDX41-208ENST00000507955 IGHV4-30-2A0A087WSY4 118 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 hDV102S1A0JD36 115 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 OR4C46A6NHA9 309 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 TCF21O43680 179 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 IGHG4P01861 327 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 TMEM75Q8N9X5 138 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 ZNF502Q8TBZ5 544 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 RABAC1Q9UI14 185 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
DDX41-208ENST00000507955 FAM110DQ8TAY7 271 aaPredicted RBP11.23□□□□□ -0.61
DDX41-208ENST00000507955 PIFOQ8TCI5 191 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 SELENOKQ9Y6D0 94 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 EPG5Q9HCE0 2579 aa11.23□□□□□ -0.61
DDX41-208ENST00000507955 SYS1-DBNDD2H3BUS1 97 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 C5orf56Q8N8D9 126 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
DDX41-208ENST00000507955 ANKRD17O75179 2603 aaKnown RBP11.22□□□□□ -0.61
DDX41-208ENST00000507955 ATP5J2P56134 94 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 PRAC2D3DTV9 90 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 K7EQM0 130 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 CHEK1O14757 476 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 CCL25O15444 150 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 PAX8Q06710 450 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 ERCC8Q13216 396 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 LYPD1Q8N2G4 141 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 CHCHD1Q96BP2 118 aaKnown RBP11.22□□□□□ -0.61
DDX41-208ENST00000507955 NDFIP1Q9BT67 221 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 MXRA5Q9NR99 2828 aa11.22□□□□□ -0.61
DDX41-208ENST00000507955 HAX1O00165 279 aa11.21□□□□□ -0.61
DDX41-208ENST00000507955 LEPROTL1O95214 131 aa11.21□□□□□ -0.61
DDX41-208ENST00000507955 CSN3P07498 182 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms