RNA–Protein interactions for RNA: ENST00000507588.1

FGFR3-209, Transcript of fibroblast growth factor receptor 3, humanhuman

TSL 1 (best)

Gene FGFR3, Length 336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR3-209ENST00000507588 LINC01587Q99440 93 aa13.21□□□□□ -0.29
FGFR3-209ENST00000507588 SLC39A9Q9NUM3 307 aa13.21□□□□□ -0.29
FGFR3-209ENST00000507588 PKD1P98161 4303 aa13.21□□□□□ -0.29
FGFR3-209ENST00000507588 PRB4P10163 310 aaPredicted RBP13.2□□□□□ -0.3
FGFR3-209ENST00000507588 UBE2DNLQ8IWF7 75 aa13.2□□□□□ -0.3
FGFR3-209ENST00000507588 OR10J6PQ8NGY7 276 aa13.2□□□□□ -0.3
FGFR3-209ENST00000507588 DYNC1H1Q14204 4646 aaKnown RBP13.19□□□□□ -0.3
FGFR3-209ENST00000507588 DNAH11Q96DT5 4516 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 PRAC2D3DTV9 90 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 H3BTX0 84 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 H7BYZ3 331 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 MPDU1O75352 247 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 UPK1BO75841 260 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 ZNF493Q6ZR52 646 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 ENKURQ8TC29 256 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 RNASE8Q8TDE3 154 aaKnown RBP13.19□□□□□ -0.3
FGFR3-209ENST00000507588 TMEM263Q8WUH6 116 aaKnown RBP13.19□□□□□ -0.3
FGFR3-209ENST00000507588 ODF3Q96PU9 254 aa13.19□□□□□ -0.3
FGFR3-209ENST00000507588 GPN1Q9HCN4 374 aaPredicted RBP13.19□□□□□ -0.3
FGFR3-209ENST00000507588 TRAV5A0A0B4J249 113 aa13.18□□□□□ -0.3
FGFR3-209ENST00000507588 FGF7P21781 194 aa13.18□□□□□ -0.3
FGFR3-209ENST00000507588 MRPL53Q96EL3 112 aaKnown RBP13.18□□□□□ -0.3
FGFR3-209ENST00000507588 ZNF586Q9NXT0 402 aa13.18□□□□□ -0.3
FGFR3-209ENST00000507588 TMEM14CQ9P0S9 112 aa13.18□□□□□ -0.3
FGFR3-209ENST00000507588 KIAA1109Q2LD37 5005 aa13.18□□□□□ -0.3
FGFR3-209ENST00000507588 NPIPB6E9PJ23 425 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 DEFB130BP0DP73 79 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 DEFB130AP0DP74 79 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 KIR3DS1Q14943 382 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 GFI1BQ5VTD9 330 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 Q6ZR54 194 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 NPCDR1Q9BY65 106 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 PARD6GQ9BYG4 376 aaPredicted RBP13.17□□□□□ -0.3
FGFR3-209ENST00000507588 NMES1Q9C002 83 aa13.17□□□□□ -0.3
FGFR3-209ENST00000507588 TIMM8BQ9Y5J9 83 aaPredicted RBP13.17□□□□□ -0.3
FGFR3-209ENST00000507588 TRBV19A0A075B6N1 114 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 A0A1B0GVY2 172 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 RTL8CO15255 209 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 PRAF2O60831 178 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 ATP5G1P05496 136 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 ATP5G3P48201 142 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 PDE6HQ13956 83 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 PTTG2Q9NZH5 202 aa13.16□□□□□ -0.3
FGFR3-209ENST00000507588 CBY3A6NI87 242 aa13.15□□□□□ -0.3
FGFR3-209ENST00000507588 M0R2N4 97 aa13.15□□□□□ -0.3
FGFR3-209ENST00000507588 HTN1P15515 57 aa13.15□□□□□ -0.3
FGFR3-209ENST00000507588 FAM3BP58499 235 aaPredicted RBP13.15□□□□□ -0.3
FGFR3-209ENST00000507588 E5RGE8 158 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 HIST1H1EP10412 219 aaKnown RBP13.14□□□□□ -0.31
FGFR3-209ENST00000507588 LEPP41159 167 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 IFITM3Q01628 133 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 NHLH2Q02577 135 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 FCN2Q15485 313 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 LINC00612Q8N6U2 182 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 SLC25A31Q9H0C2 315 aa13.14□□□□□ -0.31
FGFR3-209ENST00000507588 IGLV2-18A0A075B6J9 118 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 A6NHS1 94 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 F5H768 121 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 NDUFB4O95168 129 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 SIX6O95475 246 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 RLN2P04090 185 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 NOP10Q9NPE3 64 aaKnown RBP13.13□□□□□ -0.31
FGFR3-209ENST00000507588 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 PRELID1Q9Y255 219 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 MUC4Q99102 2169 aa13.13□□□□□ -0.31
FGFR3-209ENST00000507588 M0R3E3 92 aa13.12□□□□□ -0.31
FGFR3-209ENST00000507588 PYYP10082 97 aa13.12□□□□□ -0.31
FGFR3-209ENST00000507588 CYCSP99999 105 aaKnown RBP13.12□□□□□ -0.31
FGFR3-209ENST00000507588 GCSAMLQ5JQS6 135 aa13.12□□□□□ -0.31
FGFR3-209ENST00000507588 KCNIP2Q9NS61 270 aa13.12□□□□□ -0.31
FGFR3-209ENST00000507588 PRSS29PA6NIE9 313 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 INMT-MINDY4F8WBC2 141 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 H0YIZ8 118 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 CCDC28AQ8IWP9 274 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 THAP6Q8TBB0 222 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 FAM167A-AS1Q96KT0 104 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 FAM19A4Q96LR4 140 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 PYGO2Q9BRQ0 406 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 MARVELD1Q9BSK0 173 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 SLC25A2Q9BXI2 301 aa13.11□□□□□ -0.31
FGFR3-209ENST00000507588 SLC25A5P05141 298 aaKnown RBP13.1□□□□□ -0.31
FGFR3-209ENST00000507588 MRPL32Q9BYC8 188 aaKnown RBP13.1□□□□□ -0.31
FGFR3-209ENST00000507588 WDR61Q9GZS3 305 aaKnown RBP13.1□□□□□ -0.31
FGFR3-209ENST00000507588 TRAV12-3A0A0B4J271 114 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 KLLNB2CW77 178 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 J3KRW8 73 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 H2BFSP57053 126 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 CLINT1Q14677 625 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 RNF141Q8WVD5 230 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 ATG101Q9BSB4 218 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 AAMDCQ9H7C9 122 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 TIMM9Q9Y5J7 89 aa13.09□□□□□ -0.31
FGFR3-209ENST00000507588 C7orf71A4D174 169 aa13.08□□□□□ -0.32
FGFR3-209ENST00000507588 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
FGFR3-209ENST00000507588 NUDT3O95989 172 aa13.08□□□□□ -0.32
FGFR3-209ENST00000507588 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
FGFR3-209ENST00000507588 BLNKQ8WV28 456 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms