RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 H3BQ15 152 aa8.05□□□□□ -1.12
HMGCS1-204ENST00000507293 J3KRW8 73 aa8.05□□□□□ -1.12
HMGCS1-204ENST00000507293 LYRM1O43325 122 aa8.05□□□□□ -1.12
HMGCS1-204ENST00000507293 IGLC2P0DOY2 106 aa8.05□□□□□ -1.12
HMGCS1-204ENST00000507293 BCAP31P51572 246 aa8.05□□□□□ -1.12
HMGCS1-204ENST00000507293 MZT2BQ6NZ67 158 aa8.05□□□□□ -1.12
HMGCS1-204ENST00000507293 PXMP4Q9Y6I8 212 aa8.05□□□□□ -1.12
HMGCS1-204ENST00000507293 TRAV26-1A0A087WT03 109 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 TRAV5A0A0B4J249 113 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 FAM25EA8MYX2 175 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 C16orf90A8MZG2 172 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 CST7O76096 145 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 CAMLGP49069 296 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 CAV2P51636 162 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 OR5I1Q13606 314 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 MIC13Q5XKP0 118 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 SSX7Q7RTT5 188 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 NRARPQ7Z6K4 114 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 CCDC28AQ8IWP9 274 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 LINC00612Q8N6U2 182 aa8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 GNPNAT1Q96EK6 184 aaPredicted RBP8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 SAT2Q96F10 170 aaPredicted RBP8.04□□□□□ -1.12
HMGCS1-204ENST00000507293 RYR1P21817 5038 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 A0A0J9YY99 117 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 GAGE12BA1L429 117 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 FAM24AA6NFZ4 105 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 SNURFLB1AK76 121 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 NPIPB6E9PJ23 425 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 PLA2G10O15496 165 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 UPK1BO75841 260 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 GAGE7O76087 117 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 RLN2P04090 185 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 GAGE12FP0CL80 117 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 GAGE12GP0CL81 117 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 GAGE12IP0CL82 117 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 CT45A10P0DMU9 189 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 HOXA5P20719 270 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 LEPP41159 167 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 RAB31Q13636 194 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 GUK1Q16774 197 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 Q6ZRG5 221 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 OR1L4Q8NGR5 311 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 SEC22CQ9BRL7 303 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 C11orf1Q9H5F2 150 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 DNAJC4Q9NNZ3 241 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 UQCC1Q9NVA1 299 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 WDR83OSQ9Y284 106 aa8.03□□□□□ -1.12
HMGCS1-204ENST00000507293 TRAV6A0A075B6T7 132 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 TRAV12-3A0A0B4J271 114 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 UBE2L5PA0A1B0GUS4 154 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 C5orf51A6NDU8 294 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 TCRBP04435 133 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 M6PRP20645 277 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 RXFP4Q8TDU9 374 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 ZNF431Q8TF32 576 aaPredicted RBP8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 ODF3Q96PU9 254 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 PFDN5Q99471 154 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 SLC39A9Q9NUM3 307 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 ZNF586Q9NXT0 402 aa8.02□□□□□ -1.13
HMGCS1-204ENST00000507293 FAM240BA0A1B0GVZ2 78 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 IGSF23A1L1A6 192 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 ZNF253O75346 499 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 PVALBP20472 110 aaPredicted RBP8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 DEFA1P59665 94 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 DEFA3P59666 94 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 S100A10P60903 97 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 BAXQ07812 192 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 ASAH1Q13510 395 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 VWC2Q2TAL6 325 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 ZNF503Q96F45 646 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 C2orf50Q96LR7 162 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 PYGO2Q9BRQ0 406 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 KRTAP1-5Q9BYS1 174 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 Q9H8V8 135 aa8.01□□□□□ -1.13
HMGCS1-204ENST00000507293 ABCA13Q86UQ4 5058 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 C7orf71A4D174 169 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 M0R3E3 92 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 RPL29P47914 159 aaKnown RBP8□□□□□ -1.13
HMGCS1-204ENST00000507293 SULT1A1P50225 295 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 ERCC8Q13216 396 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 TTC32Q5I0X7 151 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 Q6ZTI0 123 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 C12orf45Q8N5I9 185 aaPredicted RBP8□□□□□ -1.13
HMGCS1-204ENST00000507293 TMEM252Q8N6L7 170 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 MRPL53Q96EL3 112 aaKnown RBP8□□□□□ -1.13
HMGCS1-204ENST00000507293 TMPRSS5Q9H3S3 457 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 LYRM2Q9NU23 88 aaPredicted RBP8□□□□□ -1.13
HMGCS1-204ENST00000507293 NUDT15Q9NV35 164 aa8□□□□□ -1.13
HMGCS1-204ENST00000507293 TRBV19A0A075B6N1 114 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 CDK2AP2O75956 126 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 H2AFB2P0C5Z0 115 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 FGF7P21781 194 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 S100A11P31949 105 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 DAZ2Q13117 558 aaKnown RBP7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 RAB32Q13637 225 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 ESRGQ1W209 222 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 STX12Q86Y82 276 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 ENKURQ8TC29 256 aa7.99□□□□□ -1.13
HMGCS1-204ENST00000507293 UPK3BQ9BT76 320 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms