RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 STAG3L3P0CL85 134 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 S100A7P31151 101 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 EIF5AP63241 154 aaKnown RBP6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 CCL20P78556 96 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 ACTL10Q5JWF8 245 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 S100A7AQ86SG5 101 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 GPR82Q96P67 336 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 SRD5A3Q9H8P0 318 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 TMEM14CQ9P0S9 112 aa6.54□□□□□ -1.36
SCAMP1-202ENST00000506858 A0A087X0K7 114 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 CTXND1A0A1B0GTU2 59 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 MAP1LC3B2A6NCE7 125 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 CD5P06127 495 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 GCHFRP30047 84 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 FXYD7P58549 80 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 TAS2R45P59539 299 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 UBE2G2P60604 165 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 ICAM4Q14773 271 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 KHDC3LQ587J8 217 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 SFT2D1Q8WV19 159 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 MAP1LC3BQ9GZQ8 125 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 TUBA4BQ9H853 241 aa6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 ZNF331Q9NQX6 463 aaPredicted RBP6.53□□□□□ -1.36
SCAMP1-202ENST00000506858 COL7A1Q02388 2944 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 ISLRO14498 428 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 FRMD6-AS1P0C7T7 363 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 C4BPBP20851 252 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 ID1P41134 155 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 SULT1A2P50226 295 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 SNRPD3P62318 126 aaKnown RBP6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 PSG3Q16557 428 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 ZNF738Q8NE65 137 aa6.52□□□□□ -1.37
SCAMP1-202ENST00000506858 TRAV2A0A0B4J234 112 aa6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 UMAD1C9J7I0 102 aa6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 PSMB3P49720 205 aa6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 ERCC8Q13216 396 aa6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 OR4B1Q8NGF8 309 aa6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 RPUSD4Q96CM3 377 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 Q9H3A6 140 aa6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 ZMAT5Q9UDW3 170 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 RPH3ALQ9UNE2 315 aa6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 YTHDF2Q9Y5A9 579 aaKnown RBP6.51□□□□□ -1.37
SCAMP1-202ENST00000506858 PGPA6NDG6 321 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 ZNF705EA8MWA4 302 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 TEX46H3BTG2 121 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 CXorf1O96002 111 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 MEOX2P50222 304 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 GNG5P63218 68 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 PQLC2Q6ZP29 291 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 MBD3L1Q8WWY6 194 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 SGK494Q96LW2 274 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 IGKV2-40A0A087WW87 121 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 H3BMM0 161 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 IGKV2D-40P01614 121 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 HIST1H1AQ02539 215 aaPredicted RBP6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 GUK1Q16774 197 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 EIF5AL1Q6IS14 154 aaKnown RBP6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 SBSPONQ8IVN8 264 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 SLC50A1Q9BRV3 221 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 RETNQ9HD89 108 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 CLEC5AQ9NY25 188 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 RNF24Q9Y225 148 aa6.5□□□□□ -1.37
SCAMP1-202ENST00000506858 A0A0J9YX75 114 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 GGTLC3B5MD39 225 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 J3KRW8 73 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 CNN1P51911 297 aaKnown RBP6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 SUMO1P63165 101 aaKnown RBP6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 KIR3DS1Q14943 382 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 TEX261Q6UWH6 196 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 STHQ8IWL8 128 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 ZNF680Q8NEM1 530 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 OR8A1Q8NGG7 326 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 SUN5Q8TC36 379 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 VGLL1Q99990 258 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 SLC35B3Q9H1N7 401 aa6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 SAV1Q9H4B6 383 aaPredicted RBP6.49□□□□□ -1.37
SCAMP1-202ENST00000506858 STAB2Q8WWQ8 2551 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 LOC102724200A0A096LPH7 203 aaPredicted RBP6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 EREGO14944 169 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 PAGE4O60829 102 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 GIG44P09565 113 aaPredicted RBP6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 HLA-DRB4P13762 266 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 ATP5G3P48201 142 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 PSG9Q00887 426 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 HAGHQ16775 308 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 CST9LP1Q5W188 147 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 EBLN2Q6P2I7 272 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 LINC00322Q6ZN03 302 aaPredicted RBP6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 TRPT1Q86TN4 253 aaKnown RBP6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 LINC00479Q96M42 142 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 AAMDCQ9H7C9 122 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 OTORQ9NRC9 128 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 TMEM167BQ9NRX6 74 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 GNG13Q9P2W3 67 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 XCL2Q9UBD3 114 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 HLA-DRB4X5D2U9 266 aa6.48□□□□□ -1.37
SCAMP1-202ENST00000506858 TRAV8-1A0A0A6YYK1 113 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 TRAV34A0A0B4J273 112 aa6.47□□□□□ -1.37
SCAMP1-202ENST00000506858 FAM74A7A6NL05 159 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms